| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0261 |
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| Symbol | |
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| ID | 4250825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 279996 |
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| End bp | 280592 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638116817 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_732399 |
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| Protein GI | 113968606 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00036521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACAG AAACCCAATC TACTCGTCAG CATATTCTCG ACGTCGGTTA CTCACTGATC
GTTAAGCAAG GCTTTTCGTG CCTAGGGTTA GCCCAACTAC TCAAGGCCGC CCAAGTACCG
AAAGGCTCGT TTTACCATTA CTTTAAATCT AAAGAACAAT TCGGCGAGGC GCTGTTAACG
GGTTATTTTG AGCAATACCA AGCAGAGCTT GATAGCTTAT TTGCCAACCC ACAACTCTCC
GGCTTTGAGC GCCAAATGCA ATACTGGCAA AGATGGCTGC ATGTACAGCA AGATGGTTGT
GTCGATCAAA AATGCTTAGT CGTTAAATTA AGTGCCGAGG TTGCCGACCT CTCAGAAGCA
ATGCGCCTTG TACTTTTAAA AGGTTCTGCA GGCATCATTG AACGCTTAAC TCATTGCATT
CAAACAGGGA TTGCGGATAA CTCCATCTGC GAACAGGATG CTCAAGCAAC GGCAGAATTG
TTGTATCACA TGTGGATCGG CGCCAGCCTG ATGAATAAAC TTGGCCACAG TCGAGCAGCC
TTAGAGCGCG CCCTAGTCAC GACCGAAGCC ATTTTAAAGA CCAAAACTGT GCGTTAA
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| Protein sequence | MKTETQSTRQ HILDVGYSLI VKQGFSCLGL AQLLKAAQVP KGSFYHYFKS KEQFGEALLT
GYFEQYQAEL DSLFANPQLS GFERQMQYWQ RWLHVQQDGC VDQKCLVVKL SAEVADLSEA
MRLVLLKGSA GIIERLTHCI QTGIADNSIC EQDAQATAEL LYHMWIGASL MNKLGHSRAA
LERALVTTEA ILKTKTVR
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