Gene Shewmr4_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0259 
Symbol 
ID4250823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp277887 
End bp278420 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID638116815 
Producthypothetical protein 
Protein accessionYP_732397 
Protein GI113968604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000328034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGTAT TAACCCTCAT CAGCTTATTG CTGCTCAGCC TGCTCGCTCA GGCAACAGTG 
TACAAATGGG TCGATAAGGA TGGAAAAGTC CATTACTCAG ATGAACCCCA CCCCAACGCC
GAGGTAGTTG AGTTAAAAGA AAAAACACTC AATCAGATTG CCCTTCCCCC GGTCAAAAAT
GACGCTAATG ACTCGCAAGT CATTCAACAA ATTCAGTACC AAGTCGTCAT CACCTCCCCC
ATGGAAGAGG AAACCGTCAG GGACAATAAC GGTGACTTTC AAGTTACTGC GACTGTTACC
CCTGAGATCA AAAGTCAGTA TCTGATGGCC TTAAAACTCG ACGGCCAAAT GGTTGGTCAG
CCTCAAGTAG GCGGCATCTT TCAACTGACT AACATCGACC GAGGTGAACA TACCATTGTT
GTCGACACTA TGACTCAAAA CGGCAAAGTC TTTGCATCTA GCTCTCCACG AAAGATATTT
CTTCATCAAG CGGCGATGAA TCCAGTCCCG AAAAAGCAAC CTAAATCCAA TTAA
 
Protein sequence
MRVLTLISLL LLSLLAQATV YKWVDKDGKV HYSDEPHPNA EVVELKEKTL NQIALPPVKN 
DANDSQVIQQ IQYQVVITSP MEEETVRDNN GDFQVTATVT PEIKSQYLMA LKLDGQMVGQ
PQVGGIFQLT NIDRGEHTIV VDTMTQNGKV FASSSPRKIF LHQAAMNPVP KKQPKSN