Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0259 |
Symbol | |
ID | 4250823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 277887 |
End bp | 278420 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638116815 |
Product | hypothetical protein |
Protein accession | YP_732397 |
Protein GI | 113968604 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000328034 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGTAT TAACCCTCAT CAGCTTATTG CTGCTCAGCC TGCTCGCTCA GGCAACAGTG TACAAATGGG TCGATAAGGA TGGAAAAGTC CATTACTCAG ATGAACCCCA CCCCAACGCC GAGGTAGTTG AGTTAAAAGA AAAAACACTC AATCAGATTG CCCTTCCCCC GGTCAAAAAT GACGCTAATG ACTCGCAAGT CATTCAACAA ATTCAGTACC AAGTCGTCAT CACCTCCCCC ATGGAAGAGG AAACCGTCAG GGACAATAAC GGTGACTTTC AAGTTACTGC GACTGTTACC CCTGAGATCA AAAGTCAGTA TCTGATGGCC TTAAAACTCG ACGGCCAAAT GGTTGGTCAG CCTCAAGTAG GCGGCATCTT TCAACTGACT AACATCGACC GAGGTGAACA TACCATTGTT GTCGACACTA TGACTCAAAA CGGCAAAGTC TTTGCATCTA GCTCTCCACG AAAGATATTT CTTCATCAAG CGGCGATGAA TCCAGTCCCG AAAAAGCAAC CTAAATCCAA TTAA
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Protein sequence | MRVLTLISLL LLSLLAQATV YKWVDKDGKV HYSDEPHPNA EVVELKEKTL NQIALPPVKN DANDSQVIQQ IQYQVVITSP MEEETVRDNN GDFQVTATVT PEIKSQYLMA LKLDGQMVGQ PQVGGIFQLT NIDRGEHTIV VDTMTQNGKV FASSSPRKIF LHQAAMNPVP KKQPKSN
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