| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0258 |
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| Symbol | |
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| ID | 4250822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 276719 |
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| End bp | 277765 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116814 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_732396 |
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| Protein GI | 113968603 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000414466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAAAG AAACGCTGCT TAATCATTTA GTCACCGCGG TACTTGTCAT TGATAAGGAT
CTTAAGCCTT GTTATGCCAA CGCCGCAGCA GAGCAGCTAT TGGGCGTTGG CAGCCACAGG
CTCGTGGAAC AAGCCCTACC GGAGCATTAT CAAGCCCTCG GTGTCGAGGC GCAAATCCTC
AGCGATGCTG TAAAAGCCGG ACAAGGCCTG ACGGTCAACA CAGCCACTTT AGTGACCTTA
GATGCCCAGC ATCATACCGT TGATTTGACA CTAATCCCGC TCGAGGATGA GGCGCAACTG
AGTCTGCTTG AGCTTAGGCA AGTCGATCAA CAACGCCGGA TCCACCAGCA ACTCAGCCAG
GATGCTCAGC AACAGGCGGC ACAATTCCTT GTTCGCAACT TGGCCCATGA GATCAAAAAC
CCCTTAGGCG GTCTACGCGG CGCGGCGCAA TTGCTCTCGC GGGAGTTAGA CGATCCGGCA
CAAAAGGAAT TTACCAATCT CATCATCGAA CAGGCCGACC GCCTGCGCAG CTTAGTGGAC
AGACTGCTCG GCCCGCAGCG GCCAACCCAA CATAGCCTGC ACAACATTCA TCAAGTGGTG
CAAAAGGTCT ATAAATTGGT GGAAATGGCG CTTCCCACCA ATATTCAATT AAAGCGTGAC
TACGACCCAT CGATCCCCGA TATCGAAATG GATCCCGACC AAATGCAGCA AGCCGTGCTG
AATATTTTGC AGAATGCGGT ACAAGCTCTT GAACACACAG GTGGTGAAAT CCTGATCCGC
ACCCGCACGC AACATCAGGT CACTATCGGT TCGCAGCGAC ATAAGCTCGT GCTGACACTG
TCCATTATCG ACAACGGCCC AGGCATACCA CCAGAGCTGA TGGACACGCT GTTTTATCCC
ATGGTCACCA GTCGTGAGCA GGGGTCTGGG CTTGGCCTGT CGATTGCCCA TAACATTGCC
AGATTACACT CGGGCAGAAT CGATTGTGTA TCCAGCCCTG GGCATACCGA ATTTATCATT
TCGTTACCGA TTTTAAGTGC CAAATAA
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| Protein sequence | MDKETLLNHL VTAVLVIDKD LKPCYANAAA EQLLGVGSHR LVEQALPEHY QALGVEAQIL
SDAVKAGQGL TVNTATLVTL DAQHHTVDLT LIPLEDEAQL SLLELRQVDQ QRRIHQQLSQ
DAQQQAAQFL VRNLAHEIKN PLGGLRGAAQ LLSRELDDPA QKEFTNLIIE QADRLRSLVD
RLLGPQRPTQ HSLHNIHQVV QKVYKLVEMA LPTNIQLKRD YDPSIPDIEM DPDQMQQAVL
NILQNAVQAL EHTGGEILIR TRTQHQVTIG SQRHKLVLTL SIIDNGPGIP PELMDTLFYP
MVTSREQGSG LGLSIAHNIA RLHSGRIDCV SSPGHTEFII SLPILSAK
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