| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0253 |
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| Symbol | |
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| ID | 4250817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 272561 |
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| End bp | 273052 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116809 |
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| Product | protein of unknown function, Spy-related |
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| Protein accession | YP_732391 |
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| Protein GI | 113968598 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000205349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000372635 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAAAA CACTATCTCC TTTAAAAGCA GGTCTATTTG CCATCTTAGC AAGCTCCGCT
GTATTTGCGA CAACAGTCAG TGCAGAGCCC GGCCAAGGCT GCGATCATCC ACGCGGTGAG
TTCCATAAAC ATGGTGACCG TATGGGCCAT GACGGTATGC ACAGAATGTT CGAAGGTTTA
GATTTAACCG ATGCACAAAA GGCCGACATT AAGAAACTGT TTGCAGAGCA CCGCGCCGCA
CGCAGCGATG ACAGACCGAC TAAGGAAGAG CGTTTAGCAC ACCGTACCGA AATGCATGCG
CTGATCACTG CGGCCAACTT CGATGAGGCG CAAGCTAAGG CATTAATGAG TGCCCAGCAG
GAAAAACGCC AAGCTCAAGC GATTGAACGG ATGAAGATGC AGAATCAGAT CTACAACCTG
CTCACGCCTG AGCAACAAGC AAAATTTAAA GCGCGATTTG AAGCACAAGC TGGTAAAGAA
CCTCGCGGTT AA
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| Protein sequence | MMKTLSPLKA GLFAILASSA VFATTVSAEP GQGCDHPRGE FHKHGDRMGH DGMHRMFEGL
DLTDAQKADI KKLFAEHRAA RSDDRPTKEE RLAHRTEMHA LITAANFDEA QAKALMSAQQ
EKRQAQAIER MKMQNQIYNL LTPEQQAKFK ARFEAQAGKE PRG
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