Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0251 |
Symbol | |
ID | 4250815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 270164 |
End bp | 271513 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116807 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_732389 |
Protein GI | 113968596 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00216243 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000495811 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCTAATC GCTTATTTAT CAAATTACTG CTCGGATTTT GGCTCTGTAG CTCACTGATT ATCGCCTTAG TCGGCTTGCT ACCCTTGCTG CAACAAAATC ACGACCGCGC ACCTATCCCG CCGCACATGC AAAAAGTGCT CGCGACTATA GCACAACGCA TTCAAGACAA TCCGACCCTC ATTAAATCCG ATTTCCTGCG CCGCTGGGAA AGGCACAGGG ATATGGAGGG CAAGCCCCTG CGACTCTATC TGGCCAACAG TCAAGGACAA GTGATTAACA CCAACAGAGT GAGCCGCGGT GTTCGCAGTT TTATGTTGAT GACAGATGAA GAAAAACAAC CCATTAGTCA TCAATTTAAA GATGAGCTAG TGTTTGGCCC CTACCAATTT AGCCTCGAAG GTGAAACCTA TTATCTCTAT GGTCGCTTGC CGGATATTCA CCCTCGCCCA TGGTTCTTCT TCTTTATCGA AAATAAGCTG CTCACCCTAA GTCTAGCCAT AGTGCTCTCG GGATTACTGT GCGCCATTCT CGCATGGCAT TTAGGTAAGC CATTAAGCTC ACTAAAGAAA AGTGCCGATG CCCTCGCCGA AGGCGACCTC AGTAACCGCG TCGATAAGGC GACCACTCAA CGTAACGATG AAATCGGCCA ACTCGCCACC GCGTTTAATA GCATGGCGGA CTCGATTGAG GCCATGGTGA AGAATCAGCA ACGTTTGATG GGGGACATTT CCCACGAACT ACGCACCCCA CTGACCCGCC TACAATTGTC ACTGGCACTG GCCCGCAAGA AAGGCCAACA GACCACTGAA ACCGACCGTA TCGCCTACGA GGCCGAGCAA CTAGAGAAAT TGATCGCAGA GCTGCTGGAG TTATCGCGGG TCAAACTCAG CACCAATGAA ACTAAAGTTC GCCTCGGATT AGCCGAGTCC CTCAGCCAAG TGCTAGATGA CGCCGAGTTT GAGGCCGATC AACAGGGCAA AAAGATCACA ATCGACATCG ATGAAGCCAT CGAGCTCGGC CATTATCCGA AATCCCTGTC CCGTGCGATA GAAAACCTGC TGCGCAACGC CATTCGTTAT GCCCAGAGCG ATATCCACCT GCGCGCGAGC CAAACCAACG GCCAAGTACA GATCACAATT AAAGACGATG GTCCGGGGAT TGATCCTGCT GAGCTTGAGG CGATTTTCAA ACCCTTCTAT CGCCCCGATT CGGCAAGGCA GCGGGAAAGC GGTGGCTGGG GCCTAGGACT CGCCATTACC GAAGCGGCCA TTAGCGCCCA TAAAGGAAAA ATCAGAGCCG AGAATCGCCA GCCCCACGGC CTCGAAGTCA ATATCAGTTT ACCGACCTAA
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Protein sequence | MPNRLFIKLL LGFWLCSSLI IALVGLLPLL QQNHDRAPIP PHMQKVLATI AQRIQDNPTL IKSDFLRRWE RHRDMEGKPL RLYLANSQGQ VINTNRVSRG VRSFMLMTDE EKQPISHQFK DELVFGPYQF SLEGETYYLY GRLPDIHPRP WFFFFIENKL LTLSLAIVLS GLLCAILAWH LGKPLSSLKK SADALAEGDL SNRVDKATTQ RNDEIGQLAT AFNSMADSIE AMVKNQQRLM GDISHELRTP LTRLQLSLAL ARKKGQQTTE TDRIAYEAEQ LEKLIAELLE LSRVKLSTNE TKVRLGLAES LSQVLDDAEF EADQQGKKIT IDIDEAIELG HYPKSLSRAI ENLLRNAIRY AQSDIHLRAS QTNGQVQITI KDDGPGIDPA ELEAIFKPFY RPDSARQRES GGWGLGLAIT EAAISAHKGK IRAENRQPHG LEVNISLPT
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