| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0241 |
|---|
| Symbol | |
|---|
| ID | 4251015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 261387 |
|---|
| End bp | 261653 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638116797 |
|---|
| Product | peptidase |
|---|
| Protein accession | YP_732379 |
|---|
| Protein GI | 113968586 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3212] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000271334 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACA GCCCAAGCTG TCTAGCCCAT GATGAAGACC TCTCCAACAA AGTGGTCGAA
TGGGTGAAGG AGGGTAAAGT ATTACCCTTC GACACCATCA TGCAACGCTA TGAGTCGCGC
CTTAAGGGGC GCTTGCTAGA CCTCGAGGTC GAGCAAAAAC ACGGGCGCAT CATCTATGAA
CTCGAAATCC TGCGTGACGA TGGCGTGGTC TATGAGATTA AGATCGATGC CAAAACGGGT
GAATGGCTTA AGGAAAAGGT CGACTGA
|
|---|
| Protein sequence | MINSPSCLAH DEDLSNKVVE WVKEGKVLPF DTIMQRYESR LKGRLLDLEV EQKHGRIIYE
LEILRDDGVV YEIKIDAKTG EWLKEKVD
|
|---|
| |