| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0231 |
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| Symbol | |
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| ID | 4251005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 246324 |
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| End bp | 246974 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638116783 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_732369 |
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| Protein GI | 113968576 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0147409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000310337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGACAAATA TAACTTCAGT AAACACACTG GTATCGGCGA GCAAGCTGAC ATGTATCCGC
GAAGAACGCA TCCTATTTGA TGAACTAAGT TTTGATATAA ATGCTGGCGA TATCATCCAG
ATTGAGGGCC CAAATGGCGC CGGCAAAACC AGCTTATTAC GTATATTGGC AGGCTTATCT
CGCCCTTACG CTGGGCAAAC CTTTTATCTC AACGAAGATA TCAATCGTTG CCGCGATGAA
TATAACGAAG ATTTGTTGTA TTTAGGCCAT CTCGCAGGGG TGAAATCCGA ATTAACCGCT
GAAGAAAACC TTAACTTCAA TTTAAGAATC AGTGGCTATG ATGATTTTGA TACTGCAGCT
ATTTTAGCTA AAGTGAATTT AGCTGGATTC GAAGAAGCGC TGGCTGGACA TTTATCCGCA
GGTCAACATC GCCGCACCGC ATTAGCAAGA CTTTGGCATA ACGATTGTAA AGTGTGGATC
CTCGATGAAC CTTTTACAGC CATTGATAAA AAAGGTGTCG AAGAGCTTGA GCAATTATTT
ATTCAACATG CGGATAATGG TGGCTGTGTG ATCCTCACCA CCCACCAAGA TATGGGCATT
ATCAAAGATG ATAGGCTTCG TAAAATTCGT CTAGATTATC GCTTCGTATA A
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| Protein sequence | MTNITSVNTL VSASKLTCIR EERILFDELS FDINAGDIIQ IEGPNGAGKT SLLRILAGLS
RPYAGQTFYL NEDINRCRDE YNEDLLYLGH LAGVKSELTA EENLNFNLRI SGYDDFDTAA
ILAKVNLAGF EEALAGHLSA GQHRRTALAR LWHNDCKVWI LDEPFTAIDK KGVEELEQLF
IQHADNGGCV ILTTHQDMGI IKDDRLRKIR LDYRFV
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