| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0230 |
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| Symbol | |
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| ID | 4251004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 245626 |
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| End bp | 246312 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116782 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_732368 |
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| Protein GI | 113968575 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.101455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000289214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAAAGAG GCATCAGCTT TACTACAGCG TTTTTCACGC TACTGCAGCG GGATCTAAAA
ATCGCCATTC GTCATCGCGG AGATATCTTT AATCCCTTGT TATTCTTCAT CATGGTCGTG
ACCTTATTTC CACTCGGTAT TGGCCCTGAA CCACAAATGT TGGCTCGCAT TGCCCCAGGG
ATTATTTGGG TTGCTGCCCT ACTGGCATCG ATGTTGTCAC TCGAGCGCCT ATTTAAAGCC
GACTTCAGTG ACGGTAGTTT AGAGCAAATG CTGCTCAGCC CACAGCCACT CTCGGTATTA
GTATTGGCCA AAGTGCTAGC CCATTGGCTA CTGACTGGCG TGCCATTAAT TATTATCGCG
CCCCTGCTCG CGGTGTTACT CAACCTAGAA GCCAACAGCT ATGGCGCACT GATCGCGACT
CTGGCGTTAG GAACACCGGT ATTGTCGCTC CTCGGCGCCA TTGGTGTGGC TTTAACCGTT
GGTTTACGTA AAGGCGGCGT GTTACTGAGT TTACTGATCC TACCGCTTTA TATTCCTGTG
CTGATTTTCG CGACCAGCGC CATAGATGCG GCAGGAATGA ATTTACCCTA TGATGGTCAG
CTCGCTATAA TTGGCGCCAT GTTGATCGGT TCGTTAACCT TAGCACCCTT TGCTATTGGT
GCATCTCTGC GAGTGAGTAC TAACTAA
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| Protein sequence | MKRGISFTTA FFTLLQRDLK IAIRHRGDIF NPLLFFIMVV TLFPLGIGPE PQMLARIAPG
IIWVAALLAS MLSLERLFKA DFSDGSLEQM LLSPQPLSVL VLAKVLAHWL LTGVPLIIIA
PLLAVLLNLE ANSYGALIAT LALGTPVLSL LGAIGVALTV GLRKGGVLLS LLILPLYIPV
LIFATSAIDA AGMNLPYDGQ LAIIGAMLIG SLTLAPFAIG ASLRVSTN
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