| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0228 |
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| Symbol | |
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| ID | 4250686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 244678 |
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| End bp | 244878 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638116780 |
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| Product | Heme exporter protein D (CcmD) |
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| Protein accession | YP_732366 |
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| Protein GI | 113968573 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0464589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000228881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCAATTCG ATTCTATCAG TGATTTTTTT AACATGGGTG GCTATGCATT TTATGTGTGG
CTTGCCTATG GCGTGACCTT CTTCTGTTTA TCGACGCTGA TCATCACCAG CGCGCGCCAA
AAGCGCAAAG TGCTAATTGA AATAGCGAAG AAGATGAACC GCGAAGAGCG CCTCAAAGAA
ACTAGGAGTA CCAAATCGTG A
|
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| Protein sequence | MQFDSISDFF NMGGYAFYVW LAYGVTFFCL STLIITSARQ KRKVLIEIAK KMNREERLKE
TRSTKS
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