Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0226 |
Symbol | |
ID | 4250684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 243079 |
End bp | 244083 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638116778 |
Product | hypothetical protein |
Protein accession | YP_732364 |
Protein GI | 113968571 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00330504 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000368394 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAACAA TAAAGCCACT GCTAAGAAGA TGGCGACTGT TCCTTCTCCT GATACCCATC TGTTACCCTG CCGCGCTATT TGCCGCTAAA GTAGTAGTGA TTGAGAGTTA TCATCAGAGC TACCTTTGGG ATAGACAATA TTATCAAGCC ATACTCGATA AAATTACCCC TGAACATCAA GTACTCCACT TCGAGATGGA CACCAAACGC CTACCTAAGG AGCGCTATGT GGAGCGAGCC GAACTGGCTT GGCAATTTAT AAAACAACAA ACACCTCAGC TCGTTATCCT TGCAGACGAC AATGCGGTGA ACTATCTCCA TCAACGTCTT AATGACAGCC AAATTCCGGT GGTTTACCTT GGTGTGAATA TCAATCCAAG GGAATACCAT TTAAACGACT ACAAGCGCTT TACAGGCGTG CTGGAGAGGC CCTTGCTGAA ACGTTCATTG CTATTGTTAC AGAGAATTCT CCCGCCGCAA AAACACAGAA AAATTTTAGT GCTGTTCGAT GACAGTAATA CCTCAAAGCT TACAGCCAAC TATATCAGCA ACCAATCGAC TAGCCTCATC AGTGATATCG AAATTCATGT GCTTAAGTTG GCAACCCTTA AGGAATGGCA GCAACAAGTC AACTCAGCGA AAGACAATGG TTATAGCGCT ATTGTTGTTG CCTTATATCA TGCCGTTAGA AATGAGCAGG AGCAGTCGGT TAATGCAGAC CAATTATTAG AGTGGATAGC AAGTAATACG CCTATACCTA ATTTTGGCTT CTGGGGGTTT AGCATCTATG CCAAGGGCAA TATAGGAGGC TATGTACTTG ATGGCTATCA TCATGGCACG ATCGCAGCGG ATATGGCACA GCGCATTCTC GACGGCGTGA CCCCAGAGAA TATCTTCCCC GTCACGGACG ACCTAGGGCA ATATCGATTT AGCTATTCAG GTATGAAGAA ATGGCAACTT ACACTGCCGA AGGAAATTGA AAAACAAACG ACTTGGGTGG ATTAA
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Protein sequence | MKTIKPLLRR WRLFLLLIPI CYPAALFAAK VVVIESYHQS YLWDRQYYQA ILDKITPEHQ VLHFEMDTKR LPKERYVERA ELAWQFIKQQ TPQLVILADD NAVNYLHQRL NDSQIPVVYL GVNINPREYH LNDYKRFTGV LERPLLKRSL LLLQRILPPQ KHRKILVLFD DSNTSKLTAN YISNQSTSLI SDIEIHVLKL ATLKEWQQQV NSAKDNGYSA IVVALYHAVR NEQEQSVNAD QLLEWIASNT PIPNFGFWGF SIYAKGNIGG YVLDGYHHGT IAADMAQRIL DGVTPENIFP VTDDLGQYRF SYSGMKKWQL TLPKEIEKQT TWVD
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