Gene Shewmr4_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0226 
Symbol 
ID4250684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp243079 
End bp244083 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content44% 
IMG OID638116778 
Producthypothetical protein 
Protein accessionYP_732364 
Protein GI113968571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00330504 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000368394 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAACAA TAAAGCCACT GCTAAGAAGA TGGCGACTGT TCCTTCTCCT GATACCCATC 
TGTTACCCTG CCGCGCTATT TGCCGCTAAA GTAGTAGTGA TTGAGAGTTA TCATCAGAGC
TACCTTTGGG ATAGACAATA TTATCAAGCC ATACTCGATA AAATTACCCC TGAACATCAA
GTACTCCACT TCGAGATGGA CACCAAACGC CTACCTAAGG AGCGCTATGT GGAGCGAGCC
GAACTGGCTT GGCAATTTAT AAAACAACAA ACACCTCAGC TCGTTATCCT TGCAGACGAC
AATGCGGTGA ACTATCTCCA TCAACGTCTT AATGACAGCC AAATTCCGGT GGTTTACCTT
GGTGTGAATA TCAATCCAAG GGAATACCAT TTAAACGACT ACAAGCGCTT TACAGGCGTG
CTGGAGAGGC CCTTGCTGAA ACGTTCATTG CTATTGTTAC AGAGAATTCT CCCGCCGCAA
AAACACAGAA AAATTTTAGT GCTGTTCGAT GACAGTAATA CCTCAAAGCT TACAGCCAAC
TATATCAGCA ACCAATCGAC TAGCCTCATC AGTGATATCG AAATTCATGT GCTTAAGTTG
GCAACCCTTA AGGAATGGCA GCAACAAGTC AACTCAGCGA AAGACAATGG TTATAGCGCT
ATTGTTGTTG CCTTATATCA TGCCGTTAGA AATGAGCAGG AGCAGTCGGT TAATGCAGAC
CAATTATTAG AGTGGATAGC AAGTAATACG CCTATACCTA ATTTTGGCTT CTGGGGGTTT
AGCATCTATG CCAAGGGCAA TATAGGAGGC TATGTACTTG ATGGCTATCA TCATGGCACG
ATCGCAGCGG ATATGGCACA GCGCATTCTC GACGGCGTGA CCCCAGAGAA TATCTTCCCC
GTCACGGACG ACCTAGGGCA ATATCGATTT AGCTATTCAG GTATGAAGAA ATGGCAACTT
ACACTGCCGA AGGAAATTGA AAAACAAACG ACTTGGGTGG ATTAA
 
Protein sequence
MKTIKPLLRR WRLFLLLIPI CYPAALFAAK VVVIESYHQS YLWDRQYYQA ILDKITPEHQ 
VLHFEMDTKR LPKERYVERA ELAWQFIKQQ TPQLVILADD NAVNYLHQRL NDSQIPVVYL
GVNINPREYH LNDYKRFTGV LERPLLKRSL LLLQRILPPQ KHRKILVLFD DSNTSKLTAN
YISNQSTSLI SDIEIHVLKL ATLKEWQQQV NSAKDNGYSA IVVALYHAVR NEQEQSVNAD
QLLEWIASNT PIPNFGFWGF SIYAKGNIGG YVLDGYHHGT IAADMAQRIL DGVTPENIFP
VTDDLGQYRF SYSGMKKWQL TLPKEIEKQT TWVD