Gene Shewmr4_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0221 
SymbolrpsM 
ID4250679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp240149 
End bp240505 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content48% 
IMG OID638116773 
Product30S ribosomal protein S13 
Protein accessionYP_732359 
Protein GI113968566 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000224904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000165465 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCCCGTA TCGCTGGCAT TAACATTCCT GATCAAAAGC ATACAGTCAT CGCATTGACT 
GCAATTTTCG GCATCGGCCG TACTCGCGCT AGAGCAATCT GCGCGGCTAC GTCAATTGCT
GAAACTGCTA AGATCAAGGA ATTGAGCGAA GCTCAAATCG ACACCCTACG CGAAGAAGTT
GCCAAATACT TAGTAGAAGG TGACTTACGT CGTGAGATTT CTATGAACAT CAAGCGTCTT
ATGGATCTTG GTTGTTATCG TGGTCTCCGC CATCGTCGTA GCCTGCCTCT TCGTGGGCAA
CGTACTAAGA CCAATGCGCG TACGCGTAAA GGTCCACGTA AACCAATCAA GAAGTAA
 
Protein sequence
MARIAGINIP DQKHTVIALT AIFGIGRTRA RAICAATSIA ETAKIKELSE AQIDTLREEV 
AKYLVEGDLR REISMNIKRL MDLGCYRGLR HRRSLPLRGQ RTKTNARTRK GPRKPIKK