| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0215 |
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| Symbol | rplR |
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| ID | 4250673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 237057 |
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| End bp | 237407 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116767 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_732353 |
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| Protein GI | 113968560 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00167241 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000126926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AAACATCTCG CTTACGTCGC GCTATTCGCG CTCGTAAGAA GATCCAAGAG
CTGGGCGTGA ACCGTCTGGT TGTACATCGT ACACCGCGTC ACATTTATGC TCAGGTGATC
AATCCTGAAG CTCAGGTGGT GGCAGCTGCT TCAACCGTGG AAAAAGCGGT TAAAGAGCAA
CTGAAGAGTA CCGGTAACGT AGACGCGGCT AAAGCAGTAG GTAAATTTGT TGCTGAGCGC
GCGATCGAGA AAGGCGTAAC TTCTGTTGCG TTCGATCGTT CTGGTTTCAA GTATCACGGT
CGTGTAGCTG CTCTGGCAGA TGCTGCTCGT GAAGCTGGCC TCCAGTTCTA A
|
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| Protein sequence | MDKKTSRLRR AIRARKKIQE LGVNRLVVHR TPRHIYAQVI NPEAQVVAAA STVEKAVKEQ
LKSTGNVDAA KAVGKFVAER AIEKGVTSVA FDRSGFKYHG RVAALADAAR EAGLQF
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