Gene Shewmr4_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0213 
SymbolrpsH 
ID4250671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp236110 
End bp236502 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID638116765 
Product30S ribosomal protein S8 
Protein accessionYP_732351 
Protein GI113968558 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000264343 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000147865 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCTAT TGCGGATATG TTAACCCGTA TTCGTAACGG CCAAGCTGCT 
AACAAAGTAT CTGTGAAGAT GCCTTCTGCT AAGCTGAAAG TCGCTATCGC GAAACTGCTT
AAAGAAGAAG GTTACATCGC TGATTACGCC GTAGCAGATG AAGCCAAGCC TGAACTGGAA
ATTACTTTAA AGTATTTCCA AGGCCAACCA GTCGTTGAGA CTATCCAGCG CGTAAGCCGT
CCTGGTCTTC GTATTTACAA AGGTAAAAAC GAATTGCCAA AAGTGATGGG CGGACTGGGT
GTCGCAATTG TGTCCACTTC TAAAGGCCTG ATGACTGATC GTGCCGCCCG CCTTGCAGGC
ATGGGTGGCG AGGTTATCTG CTACGTAGCA TAA
 
Protein sequence
MSMQDPIADM LTRIRNGQAA NKVSVKMPSA KLKVAIAKLL KEEGYIADYA VADEAKPELE 
ITLKYFQGQP VVETIQRVSR PGLRIYKGKN ELPKVMGGLG VAIVSTSKGL MTDRAARLAG
MGGEVICYVA