| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0211 |
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| Symbol | rplE |
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| ID | 4250933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 235230 |
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| End bp | 235769 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638116763 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_732349 |
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| Protein GI | 113968556 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000226613 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000144866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATAA ATATCAAGAG ACTGTTGTCG CTGAACTGAC TAAAAAGTTC
GGTTATACCA GTGTCATGCA AGTCCCTCGG ATTGAGAAAA TCACCCTGAA CATGGGTGTT
GGCGAAGCCG TTGCAGACAA AAAAGTTATG GAACATGCTG TTCGTGACAT GACTGCAATT
GCTGGTCAAA AACCAGTAGT AACTGTTGCT CGTAAATCAG TTGCTGGTTT TAAAATCCGT
GAAGGCTACC CTATTGGCTG TAAAGTGACC CTGCGCGGTG AGCGTATGTG GGAATTCTTA
GAGCGTTTAG TTGACATCGC AATCCCACGT ATTCGTGACT TCCGTGGTCT GAGCGCTAAA
GCGTTTGACG GCCGTGGCAA CTACGCGATG GGCGTGCGTG AGCAGATCAT TTTCCCAGAA
ATCGATTACG ATAAAATCGA TAAGATTCGC GGTATGGATA TTGTTATCAC TACCTCTGCG
AATACTGACG AAGAAGGTCG TGCTTTGTTA GACGCTTTTA ACTTCCCATT CAAGAAATAA
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| Protein sequence | MAKLHDKYQE TVVAELTKKF GYTSVMQVPR IEKITLNMGV GEAVADKKVM EHAVRDMTAI
AGQKPVVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFL ERLVDIAIPR IRDFRGLSAK
AFDGRGNYAM GVREQIIFPE IDYDKIDKIR GMDIVITTSA NTDEEGRALL DAFNFPFKK
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