| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0180 |
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| Symbol | |
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| ID | 4250725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 200848 |
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| End bp | 201312 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638116723 |
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| Product | RNP-1 like RNA-binding protein |
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| Protein accession | YP_732318 |
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| Protein GI | 113968525 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000725181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.749946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAGT CATTTCTTAT TGTTTTGGTT ATTGCCATTC TCGGCGCAAT CGCGCTATCT
CAATTTGCAA CTACATTACC TGCGTACATC GCTTTTGTTG CTGGCGTTAT CATTACTACT
CTCGTTTTTA AATTTGTCCC AGAGACAAAC CAAGCTCAAG GTTCCGATGA GCAATATGTT
GGCCCGACCA TGACACTCTA TGTAGGCAAC TTGCCTTATC GTGTCCATGA GGGTGAAGTA
AAGGTTCTGT TTGGTGAGTT TGGTCCCGTC AACTCGGTAC GTTTAGTACG TGATCGCAAG
ACCGGTCGTC GTAAAGGTTT CGGCTTTGTG GAAATGTCTG AGGCGGGTGC TCAAAAAGCA
ATGGTTAAGT TGAACGACTT TAACTTCCAA GAAAGAACAT TAAAGGTTAG AGAAGCGAAG
ACTCAAGATT CGGAAGCTGC CGACCGTACA GGTACCGATG AATAA
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| Protein sequence | MQKSFLIVLV IAILGAIALS QFATTLPAYI AFVAGVIITT LVFKFVPETN QAQGSDEQYV
GPTMTLYVGN LPYRVHEGEV KVLFGEFGPV NSVRLVRDRK TGRRKGFGFV EMSEAGAQKA
MVKLNDFNFQ ERTLKVREAK TQDSEAADRT GTDE
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