Gene Shewmr4_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0175 
Symbol 
ID4250703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp195690 
End bp196748 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content52% 
IMG OID638116718 
Productselenophosphate synthetase 
Protein accessionYP_732313 
Protein GI113968520 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0709] Selenophosphate synthase 
TIGRFAM ID[TIGR00476] selenium donor protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATT CCGCTGTATC TTCCGCCAAT AGCATTAAAC TCACAGAATA TAGTCATGGT 
GCCGGCTGCG GCTGTAAAAT TTCCCCTAAA GTACTGACCA CGATTCTTGC CTCGCAGCTG
CCTGTATTCA CCGATCCTAA CCTGTTGGTC GGCAATCAAA GCCGTGATGA TGCAGCCGTT
TATAAGCTCA ATGATGAAAT CGGCATTATC AGCACCACCG ACTTTTTTAT GCCTATCGTA
GATGACCCCT TTACCTTCGG CCGTATCGCT GCCACCAATG CCATTAGCGA TATCTATGCC
ATGGGTGGCA CGCCCATGAT GGCGATTGCG ATATTAGGCT GGCCAGTGAA CAAACTCCCC
GCCGAGATCG CGCAGCAAGT AGTCGATGGC GGCCGTCAAG CCTGTATGGA AGCTGGGATA
ATGCTGGCCG GTGGTCACAG TATCGATGCG CCTGAGCCAA TCTTTGGCCT TGCGGTCACT
GGGCAAATCG CCCTGACGGA TTTAAAACAA AACGATACCG CAAAAGCGGG CGATCGCTTG
TATCTCACTA AACCTATCGG TATTGGCATT CTCACCACGG CACAAAAGCA GAAGAAGCTC
AAAGATGAAG ATAGCCAAAT TGCAGTCAAT GCCATGTGCC AGCTTAATAG CATAGGCGCC
AAAATTGCAA AGATTAAAGG CGTGAATGCC CTCACCGATG TCACAGGTTT TGGCCTTGCG
GGCCACCTAC TGGAAGTATG CCAAGGCGCT AAACTCACCG CTAAACTTGA CCTCGATTCG
GTGCCACTCT TGCCCCGCGC CCTCGACTAT CTAGCGCAAG GCTGTATTCC CGGTGGCACC
CATCGTAACT ACGACAGTTA TGGCGAACAC TTGCCCGCAC TTACCGATCA TCAAAAAGCC
ATTTTGTGCG ACCCACAAAC CAGTGGCGGC TTGCTAGTGG CGGTGTCGAG TGAGGCCGAA
GCAGAACTGG TAGCACTGCT GAATGCCCAT CAAATTGAGC CTATCTGTAT TGGTTCGCTA
GAAACGCCCA CCTCCACCGC CAATGTGGTG CTGTGTTAA
 
Protein sequence
MSNSAVSSAN SIKLTEYSHG AGCGCKISPK VLTTILASQL PVFTDPNLLV GNQSRDDAAV 
YKLNDEIGII STTDFFMPIV DDPFTFGRIA ATNAISDIYA MGGTPMMAIA ILGWPVNKLP
AEIAQQVVDG GRQACMEAGI MLAGGHSIDA PEPIFGLAVT GQIALTDLKQ NDTAKAGDRL
YLTKPIGIGI LTTAQKQKKL KDEDSQIAVN AMCQLNSIGA KIAKIKGVNA LTDVTGFGLA
GHLLEVCQGA KLTAKLDLDS VPLLPRALDY LAQGCIPGGT HRNYDSYGEH LPALTDHQKA
ILCDPQTSGG LLVAVSSEAE AELVALLNAH QIEPICIGSL ETPTSTANVV LC