Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0173 |
Symbol | |
ID | 4250701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 192619 |
End bp | 194481 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638116716 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_732311 |
Protein GI | 113968518 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTAA CAAAACGTTT TTTACCGTAT TTTGCAACCC AATGCCTTGG GGCGCTTAAC GACAATATCT ATAAAAATGT GTTGTTGCTG CTGGTTACCT TCAGCCAAGT CAACGATTTA CCTATTAGTG TCGACATGTT TGTCAATTTG GCGGCGGGGG TCTTTATCCT GCCGTTTTTC CTATTTTCGG CCCATGCAGG CGTGGTGGCC GACAATATGG ATAAGGCCAA ACTTATCCGC CGATTAAAAC TGCTCGAAGT CATCATTATG TTCAGTGCCG CTGCGGCCAT CGTGAGCGAA AATTATATGA TGATGTTATT ACTGTTGTTT TTAACCGGTA GTCAGTCAGC TTATTTTGGC CCGGTCAAAT ATTCCCTATT ACCTCAAGCC TTAAAAGAGG ATGAGTTAGT GACGGGCAAT GCCTGGGTTG AGATGGGGAC GTTTCTGTCT ATCTTGATTG GTACCTTGAG TGCCGGGATT TTAGTATCTG AAAACAATGC CACCCTATGG TCGGCCATCA CGGTCGCGAG CCTTGCCTTG GCGGGGTATT TATCTAGCCG CGCGATCCCT GCTTTACCGC CGCAGGGCAC AGTAGAAAAA ATCCAATTTC TTCCATTATC AGGCACTTGG CGCACCATAA AGAAGGCTCG CCAAACGCCT TCGATTTGGA TGGCCATCCT CGCCATTAGC TGGTTCTGGT TCTTGGGGGC CACATATCTG ACCCAATTCC CTAACTTTGC CAAGCTGCAT TTGCATTCTG GCGCGACTGT AGTGTCGCTG CTGCTGGGGA TGTTCTCTAT CGGTATTGCG GTGGGCTCCT TTGTCTGTGA GCGTTTTTCT TTTGGCCATG TGGAGTTAGG CTTGCTGCCC TTTGGGGTGC TAGGGTTAAC TGTATTTGGT GTGGACTTGC TGTGGGCGAT TCCTTCTGCA CCTGCGGATG CGCAGTTTGT CTATGGCTTA CACTCCTTTA TTGCCGAGCA GAAGCATTAT CGAGTGATGT TGGACTTCTT TATGATTGGT GTCAGCGGTG GTCTGTTTAT CGTGCCTCTG TACGCCTTTA TTCAAGCGCG CTCCGCTAAG GGAGAATGTG CGCAAGCGAT TGCCGCGAAT AACATTATGA ACTCGCTGTT TATGGTGGCG TCGGCGTTGT TGTCTATGCT GTTACTCGGG GTGGCTGGCT TGAGTATTCC ACAGTTATTC TTACTGCTGG CGGTGATGAA CTTTGTGGTT GCGCTTTACG TGTATTCGCA GGTGCCTGAG TTCACACAAC GATTTATCAG TTACTTACTC AGCCATGTGA TGTATCGGGT GACTGTGACT GGGCGAGAAA AGATCCCAAA AGAAGGCGCT GGCATCATAG TCTGTAACCA TGTGAGCTAT GTGGATGCGT TGATTATTAT GGGAGCCTCG ACCCGGCCGA TTCGTTTCGT GATGGATAAA TCCATCAGTG AAATCCCAGT GCTGAAATAC CTGTTCCGCC ATGCCGGGGT GATCCCGATT TGTTCGCCGC GTCAGAGTGA GGCAACTTAC AATCAAGCTT TTGAATCGAT TCATGAGGCG TTAGCGAATG GCGAATTGGT ATGTATCTTC CCCGAAGGCC GCTTAACCCC CGATGGTGAA CTTGGTGAGT TCCGTCCCGG TATCGATAAA ATCTTGGCCC GCGATCCCGT GCCCGTGATC CCTATGGCGC TCAATGGCCT GTGGGGCTCT TACTTTAGTC ATAAGGATGG CCATGCATTG ACCACAATGC CGAAACGCTT TTGGTCCAAG GTATCGGTGA GCTTAACGGA TGTGGTGGAT GGACAAAATG CTGATCGGCA CTCGCTCAGG GATAGTGTCG CGAATCTACT CAATAAGTCC TAA
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Protein sequence | MLLTKRFLPY FATQCLGALN DNIYKNVLLL LVTFSQVNDL PISVDMFVNL AAGVFILPFF LFSAHAGVVA DNMDKAKLIR RLKLLEVIIM FSAAAAIVSE NYMMMLLLLF LTGSQSAYFG PVKYSLLPQA LKEDELVTGN AWVEMGTFLS ILIGTLSAGI LVSENNATLW SAITVASLAL AGYLSSRAIP ALPPQGTVEK IQFLPLSGTW RTIKKARQTP SIWMAILAIS WFWFLGATYL TQFPNFAKLH LHSGATVVSL LLGMFSIGIA VGSFVCERFS FGHVELGLLP FGVLGLTVFG VDLLWAIPSA PADAQFVYGL HSFIAEQKHY RVMLDFFMIG VSGGLFIVPL YAFIQARSAK GECAQAIAAN NIMNSLFMVA SALLSMLLLG VAGLSIPQLF LLLAVMNFVV ALYVYSQVPE FTQRFISYLL SHVMYRVTVT GREKIPKEGA GIIVCNHVSY VDALIIMGAS TRPIRFVMDK SISEIPVLKY LFRHAGVIPI CSPRQSEATY NQAFESIHEA LANGELVCIF PEGRLTPDGE LGEFRPGIDK ILARDPVPVI PMALNGLWGS YFSHKDGHAL TTMPKRFWSK VSVSLTDVVD GQNADRHSLR DSVANLLNKS
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