| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0153 |
|---|
| Symbol | hslO |
|---|
| ID | 4250875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 175193 |
|---|
| End bp | 176053 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638116696 |
|---|
| Product | Hsp33-like chaperonin |
|---|
| Protein accession | YP_732291 |
|---|
| Protein GI | 113968498 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.251791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAG ATATTTTACA CCGCTACCTG TTCGACAATG CCGATGTGCG TGGTGAACTC
GTACAGTTAC AAGACAGCTA TCAACAGGTG ATTGGCTCAC ATGCTTACCC ACCCGTGTTA
CAAATCCTGC TGGGTGAATT ACTGGCGGCA ACCTCTTTAT TAACCGCCAC CTTAAAATTC
AGTGGCGATA TCAGCGTGCA ACTGCAAGGT AACGGCCCTG TATCACTGGC GGTGATCAAT
GGTAGCAACC AGCAGCAATT GCGCGGCATT GCCCGCTGGG ATGGCGAGTT AGCCGACGAT
GCCAGCCTAG CCGATCTGTT TGGCCAAGGT TATATGGTTA TCACCCTGAC ACCGGATGAA
GGCGAGCGTT ACCAAGGCGT GGTTGCCCTC GACAAGCCAA CCTTAGCAGC CTGTGTGGAA
GACTACTTTA ACCAGTCAGA ACAATTACCT ACCGCGCTCT GGTTATTTGC CGACGGTAAG
CAAGCTGCGG GTATGTTCCT GCAAGTATTA CCAAGCCAAG AAGACCACAA TGCCGACTTC
GAACATTTGT GTCAGCTGAC TGCCACCATC AAGGCGGAAG AGTTATTCAC CTTAGAGGCG
CAGGAAGTAT TGCACCGCTT ATATCACCAA GAAGATGTGC GTCTGTTCGA CCCAATCGAA
GTCTGCTTTA AATGTACTTG TTCACGTGAG CGCAGCGCGG CAGCCATTAA GACTATCGAT
CAAGCCGAAG TGGAAGCTAT TCTGGCGGAA GATGGAAAGG TCGAAATGGG CTGTGAATAC
TGCAATGCCA AATATGTGTT TGATGGTATT GATATCGCAG CAATCTATGC CAATGGCACA
GCTTCAAATA CCCAGCAGTA A
|
|---|
| Protein sequence | MIQDILHRYL FDNADVRGEL VQLQDSYQQV IGSHAYPPVL QILLGELLAA TSLLTATLKF
SGDISVQLQG NGPVSLAVIN GSNQQQLRGI ARWDGELADD ASLADLFGQG YMVITLTPDE
GERYQGVVAL DKPTLAACVE DYFNQSEQLP TALWLFADGK QAAGMFLQVL PSQEDHNADF
EHLCQLTATI KAEELFTLEA QEVLHRLYHQ EDVRLFDPIE VCFKCTCSRE RSAAAIKTID
QAEVEAILAE DGKVEMGCEY CNAKYVFDGI DIAAIYANGT ASNTQQ
|
|---|
| |