| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0145 |
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| Symbol | |
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| ID | 4250867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 162291 |
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| End bp | 164267 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638116688 |
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| Product | peptidase M14, carboxypeptidase A |
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| Protein accession | YP_732283 |
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| Protein GI | 113968490 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.666966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGT TTTCCCCTTC CGTTATCGCC ATTGCCTGCT TATCGGCGGG TTCACTATTC
ACCGCCCAAT TTGCCGTTGC CGCGAATACC GAAGTCGCGC AACCCGAAGT GACAACGACT
GGAGCTGCCA ACACTGAGGC CGTTAAAACC GACGCGGTTG ACGCCAGCGC CGACAGCAGC
GCTTCACCCG CGGCAGTAGC CACTCCCGCA GCCGCAGCGA CACCGACTCG CGCCAACACC
TTTGTGAATG ATGCCATTCT CCCACCAAGC ATCACTTGGC ACGGAAGCAG CGAAGCCCTG
TTACTCAGCG CCGATAACGA ATGGGCGACG CCCTTCGAGC AAAGCAACGG CATCGAAAGC
CCAAGCTATG ACGACACCAT TACTTGGCTC GACCGATTGG CGGCCGAAAC CACCAAATTG
CAGAAAGTCA GCCTAGGTAA GAGCCCTCAA GGGCGCGACA TTTGGATGTA TGTCGCCAGC
AGCGAAGGCA TTAACGAATC TGCACGCTTA AAGCAAAACA CTAAGCCGAC GATTCTGGTG
CAGGCCGGGA TCCACGCGGG CGAAATCGAC GGTAAAGACG CCGGCATGAT GTTGCTGCGG
GATATAGTCA AAGGCGACAA GAGCGACCTA CTCGAAAAGG CTAACTTGCT GTTTGTGCCT
ATGTTTAGCG TCGATGCCCA TGAGCGCAGC GGCGAATTTA ACCGCGTTAA TCAACGCGGC
CCAGTCAATA TGGGTTGGCG CACCAATGCC AATAACCTCA ACCTAAACCG CGACTACGCC
AAGGCCGACA CCTTAGAAAT GCAGCATATG CTGCGGGCAA TCAATGTGTG GCAACCGGAT
CTGTATATCG ATGTGCATGT CACCGACGGT ATCGACTACC AGTACGACAT CACCTTCGGC
TACAACCTCG CCCAAGGCTT GAGTCCCGCC AGTTTCCGCT GGCTCGAAAA TAGCTACCGC
CCAGCGGTCG AAGCGGCATT AACCGCCCAA GGCCATATCC CTGGTCCGCT GATTTTCGCC
GTCGACAATA CCGATATCAC TAAAGGCATG TCACTGTGGA ACCCTAGCCC ACGCTTCTCT
AATGGTTATG GTGATGCCCG CCATCTGCCC ACCATTTTGA TTGAGAACCA CAGCTTAAAA
CCCTTTAAGC AGCGCGTACT TGGCACTTAT GTAATGCTAG AGCAAACCCT GAAAACCGTG
GGTGACCAAG CGACCAAGTT AAAGAGTGCG ATTCAAGAGG ATAAATACCG CGCCTCGCCA
CTGATCACAT TAACGTGGAA ATCGGCGCCA CTGGCTAAAG GCTGGGATTT TAAAGGCATA
GATTACAAAC TTGAGCAGAG CCCGATTAGC GGCACCGAGG TAGTGCGTTG GACAGGCGAG
CCTAAGCTGT ACCCCAATTT ACCTGTGATT GCCGAAACTG TGCCCGATAT CAAAGTCACT
CGCCCGAGTG CTTACTATAT TCCCGCCCAG TGGACACAGG TGATCGACCG CTTAAATCTA
CACGGCGTTC GGATGACACG TTTAAGCAAG CCAACCGAGC TTAAATTGCA GCAATATAGC
TTGAGCAATC CGGTGTTTAA TACCAAGGCG TTCGAGGGGC GACTCACAGT GAAGGCCGAC
TCGACACTAG CCAAACTGAC CACCACCTTG CCCGCGGGCA CAGTGAAAAT CAGCACAGAT
CAACCCTTAG GCGATCTGGC GATTTTACTG CTCGAGCCAC AATCACCGGA CTCGTTACTG
CAATGGGGCT TCTTCAACCC TATCTTTACC CGTACCGAAT ACATTGAGGA CTACGCGGTA
GAGCCGCTGG CCGCCAAGAT GCTTAAGGAA GATCCCAAGC TGCAGGCGGA ATTTAACAAA
GCGCTGGAAA ACCCAGAGTT TGCCGCCGAT CCCGAGGCAC GCTTACGCTG GTTCTATGAG
CGCAGCCCTT ACTACGATAA CCAATATCTT AAGTATCCAG TCTACCGTAG CCGTTAA
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| Protein sequence | MRLFSPSVIA IACLSAGSLF TAQFAVAANT EVAQPEVTTT GAANTEAVKT DAVDASADSS
ASPAAVATPA AAATPTRANT FVNDAILPPS ITWHGSSEAL LLSADNEWAT PFEQSNGIES
PSYDDTITWL DRLAAETTKL QKVSLGKSPQ GRDIWMYVAS SEGINESARL KQNTKPTILV
QAGIHAGEID GKDAGMMLLR DIVKGDKSDL LEKANLLFVP MFSVDAHERS GEFNRVNQRG
PVNMGWRTNA NNLNLNRDYA KADTLEMQHM LRAINVWQPD LYIDVHVTDG IDYQYDITFG
YNLAQGLSPA SFRWLENSYR PAVEAALTAQ GHIPGPLIFA VDNTDITKGM SLWNPSPRFS
NGYGDARHLP TILIENHSLK PFKQRVLGTY VMLEQTLKTV GDQATKLKSA IQEDKYRASP
LITLTWKSAP LAKGWDFKGI DYKLEQSPIS GTEVVRWTGE PKLYPNLPVI AETVPDIKVT
RPSAYYIPAQ WTQVIDRLNL HGVRMTRLSK PTELKLQQYS LSNPVFNTKA FEGRLTVKAD
STLAKLTTTL PAGTVKISTD QPLGDLAILL LEPQSPDSLL QWGFFNPIFT RTEYIEDYAV
EPLAAKMLKE DPKLQAEFNK ALENPEFAAD PEARLRWFYE RSPYYDNQYL KYPVYRSR
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