Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0137 |
Symbol | |
ID | 4250630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 155593 |
End bp | 156012 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638116680 |
Product | excinuclease ABC subunit C |
Protein accession | YP_732275 |
Protein GI | 113968482 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0489368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGAAG CCGCTAATTC AACTCCCTCG GCTAGCCCCC AAAAAGGGGC TAGCCAAGCG CCAGCTGTTA ACCAAACTCA GCTTTCGAGC AAGCCTGAAG CGCAAGTAAC TGAGCAAGCT GTGACTTCGG AGCAAGACGC GACATCAGAG ATAGAACAAG TCTCGACGTG GTATTTGTAC CTTATCCGTT GCGCCAATGG CCACTTATAC ACAGGCATCA CCACAGATGT CGCCCGCCGC TTTAACGAAC ATCAATCAAG CAGCCCCAAG GCAGCAAAGT ACCTGCGCGG CAAAGGGCCA TTAACCCTGA TGTATCAAGA GCAAGTCGGC ACCCGCAGTG ATGCACTCAA GCGTGAGATT GCGGTTAAAA AGTTAAGCCG CAGTCAAAAG CTGGCGTTGA TTGAATCTGT ACTCAGATGA
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Protein sequence | MIEAANSTPS ASPQKGASQA PAVNQTQLSS KPEAQVTEQA VTSEQDATSE IEQVSTWYLY LIRCANGHLY TGITTDVARR FNEHQSSSPK AAKYLRGKGP LTLMYQEQVG TRSDALKREI AVKKLSRSQK LALIESVLR
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