Gene Shewmr4_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0137 
Symbol 
ID4250630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp155593 
End bp156012 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content51% 
IMG OID638116680 
Productexcinuclease ABC subunit C 
Protein accessionYP_732275 
Protein GI113968482 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0489368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAG CCGCTAATTC AACTCCCTCG GCTAGCCCCC AAAAAGGGGC TAGCCAAGCG 
CCAGCTGTTA ACCAAACTCA GCTTTCGAGC AAGCCTGAAG CGCAAGTAAC TGAGCAAGCT
GTGACTTCGG AGCAAGACGC GACATCAGAG ATAGAACAAG TCTCGACGTG GTATTTGTAC
CTTATCCGTT GCGCCAATGG CCACTTATAC ACAGGCATCA CCACAGATGT CGCCCGCCGC
TTTAACGAAC ATCAATCAAG CAGCCCCAAG GCAGCAAAGT ACCTGCGCGG CAAAGGGCCA
TTAACCCTGA TGTATCAAGA GCAAGTCGGC ACCCGCAGTG ATGCACTCAA GCGTGAGATT
GCGGTTAAAA AGTTAAGCCG CAGTCAAAAG CTGGCGTTGA TTGAATCTGT ACTCAGATGA
 
Protein sequence
MIEAANSTPS ASPQKGASQA PAVNQTQLSS KPEAQVTEQA VTSEQDATSE IEQVSTWYLY 
LIRCANGHLY TGITTDVARR FNEHQSSSPK AAKYLRGKGP LTLMYQEQVG TRSDALKREI
AVKKLSRSQK LALIESVLR