| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0124 |
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| Symbol | |
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| ID | 4251003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 136100 |
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| End bp | 138955 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638116667 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_732262 |
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| Protein GI | 113968469 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000377031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000937896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCTATTG AGTCATACTT AACCAAGGCG GTGCGAGTAG CTCTCGTTGC GAGTACTGCA
AGTATTATGT TTGGGGCTTC TGCATATGCG GCAGAAGATG CTCCGGGTGC AAACAAGAAA
GAAGAAGTTG AAAGAATTGC AGTTACAGGT TCGCGTATCA TTCGTGAAGG GGCCATTGCT
CCAACTCCAG TTACGGTTAT CACAGGCGAG GAGTTACTCT CTACTGGTGT TACAAACATT
GGTGAGGCGT TAAACCAATT ACCCGCTTTA GGTAGTACAT ATTCGCTTGC TAACTCTGGT
CGTTTTATTG GTACTTCAGG TCTTAACTTG CTTGACCTTC GTAACATGGG GACTGATAGA
ACTTTAGTGC TTGTTGATGG CCGCCGCCAT GTCGCGAGCT CTTCTGGCAC ATCTTCCGTT
GACATTAACA CTATTCCTAG TACATGGGTT GAAAAAGTAG AAGTTATTAC TGGTGGTGCA
TCTGCTATTT ATGGTGCCGA TGCAGTAACT GGTGTTGTTA ACTTTATTTT AAAGAAACAT
GTAACTGGAT TAGATGTCTC TACTACGTTA GGAACTGCTG AAGATAGCAA TTTTACTAAA
AAGCGTTTTT CAGTTTCTTA CGGTACCGAC TTTGACAATG GTAGAGGTAA TATCGCTGGT
GCTTTTGAGT ATAGCGGTCA AAACCAGCTA AAGGCATTCG ATCGAGATCA AACCGCGACT
TCATTTGCGT CCATCACAAA CTCCAATCGT CCTAATGGTG ATGAAAACGA CCCAGCTTAT
CCTGATAAAA TCTTAACTCC AAATGCTGGA CATTATCGAA TCAGCAACGC TGGAACATTT
AATCTAAATG GCTGGAAAAC CTTTAATCCA GATGGCTCAA TTAAAGATGT TTATATTGGA
CCTAATTCAG ATGGTGGTTA CTGTGCAGAC TGTGATTACA CTAACTTGAA CCAGTTCGTT
GAGTTGCAGC CGGAGTTTGA TCGTTATAAT TTCAACGTCA AAGGTAACTA TGCTATCTCT
GACGATATGA ATTTCTACGC AGAAGGGAAA TATGTGAGAA GCAAGTCTCA TGATATGTTC
CAACCAGCGT TTTTCTTCTT TAATCCTGTG AACACAATCA GTATTGATAA CGCATTCATT
CAAGATGACC TGCGTGACTT AATGACTGCC AATGGTAAAA CAAGCTTAAC TATCAACCGA
TTCACGACGG ATTTAGGTTT GCGTCTTGAA GATGATACCC GTGAAACACA AAGATATGTT
GTTGGGTTGG AAGGCAATCT CCTTGAAGAT TGGTCATACG ACGTCTTTGC TACGTACGGG
CAAACCGATC TTGAGCGTGT AAACCGTAAT AACCTAGTTT ATGCGAATTA TGAAAATGCT
TTAGATTCTA TTCTTGTTGA TGGCGTTGCA GTTTGCCGTG ATGAGGCTGC AAGAGCTGCT
GGTTGCGTGC CTGTAAACAT TTTTGGTGAT GGTCAAGCAA GCCAGGGTGC GCGTGATTAC
ATCAACACCA CGTCTACAGG TTCTTCTGTT ATTAAGCAAA CTGTGTTGGG TGGTTCTGTA
ACTAATTCTG CATTGTTTGA TTTACCAGCA GGCGCAGTTG GTTTCTCTGC TGGTGTTGAA
TACCGTAAAG AAGAAAGCGA AGTCTTTGAA CCTGATAATG CTGAAGGTAC CTTCTTCAAC
GTGTTAGGTG AAGATAAAGG CGACTTTGAT GTTAAAGAAG TATTTGCAGA GATCAGTGTA
CCGCTGTTGA GTGATCTTCC ATTAGTTCGC CAGTTAGACG CTGAATTGGC TGCACGTTAT
GCGAATTACA GTACAATTGG AAGCGCTACA ACATGGAAAG CGGGTTTGAG TTGGGAGGTC
TATGATGATC TTCGTATTCG ATCTACTTAC TCTGAGGCTA TTCGTGCGCC TAACATTAGC
GAGTTGTTTG GTGCGCAAAG TCAAAACTTT TTCAACGTAG ATGACTCTTG TAAATCTTCT
GAGCTTGATA ATTTAGCTAA TTCAGAGCTT CGTCGTCAGA ACTGTGCGGC GTTGGGGATC
CCAACAAGTT TCGATTCAGA CTACGATTCT GCAAGTGTTG ATGGTTTCTC AGGTGGTAAC
AGAGAGCTTA AAGCAGAAGA ATCTACAAGT TATACTGTTG GTGGTGTTTT CCAACCAAGC
TTTGTTGATG GCTTAGTGCT AACTGTTGAT TATTGGAATA TCAAAATTGA CGATGCTATC
AGCGCGGTTT CTGCCCAAGA TATTATTGAC AAATGTGTTG ATTCTCCAAG TGGCGTTAAC
AACGAATATT GTGCGTTGAT TACACGTGAT CCAAACAGTC ACGAAATTAC ATCAATTCGT
CAATATGCGT TGAATATCTC TTCATTAGAA GCTGCTGGTA TCGATTTCGA TATCGGTTAC
AACTTTGAAC TCTTTGGTGG TGATTTACGT TCAAACTTGA TTGCGACCAA GTTACTCAAG
AGAAGAGATT ACTCATTCCA AGATGAACCA GATGTCTATG AAAACTATGT AGGTGTAGTT
GGTACTCCTG AATGGCAGGC TAACTTAACC TTTAACTATT CATGGAATAG CTGGCAGGCT
ACTTGGAGAA CTCGCTTCAT TGAGGGGGTA AGCTTATACA CAGATCAAGA GCTTGCAGTA
AATGCTAACC CAAATAGCCT ATTATCTTAT GGTGACTATT ACATTAGCGA TATGGGTATT
GGGTACAACT TCGATAATGG TATAGAGCTG AAGGTTGGTG TCGATAACCT GTTCAATAAA
GACTTACCTT ACGGGTCTAC TGGTACAACA GCTGGTTCTG CGGCTTATGA CAACATAGGA
CGTTTCTTCT ATACAACCAT TAGCTTTAGT CTGTAA
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| Protein sequence | MAIESYLTKA VRVALVASTA SIMFGASAYA AEDAPGANKK EEVERIAVTG SRIIREGAIA
PTPVTVITGE ELLSTGVTNI GEALNQLPAL GSTYSLANSG RFIGTSGLNL LDLRNMGTDR
TLVLVDGRRH VASSSGTSSV DINTIPSTWV EKVEVITGGA SAIYGADAVT GVVNFILKKH
VTGLDVSTTL GTAEDSNFTK KRFSVSYGTD FDNGRGNIAG AFEYSGQNQL KAFDRDQTAT
SFASITNSNR PNGDENDPAY PDKILTPNAG HYRISNAGTF NLNGWKTFNP DGSIKDVYIG
PNSDGGYCAD CDYTNLNQFV ELQPEFDRYN FNVKGNYAIS DDMNFYAEGK YVRSKSHDMF
QPAFFFFNPV NTISIDNAFI QDDLRDLMTA NGKTSLTINR FTTDLGLRLE DDTRETQRYV
VGLEGNLLED WSYDVFATYG QTDLERVNRN NLVYANYENA LDSILVDGVA VCRDEAARAA
GCVPVNIFGD GQASQGARDY INTTSTGSSV IKQTVLGGSV TNSALFDLPA GAVGFSAGVE
YRKEESEVFE PDNAEGTFFN VLGEDKGDFD VKEVFAEISV PLLSDLPLVR QLDAELAARY
ANYSTIGSAT TWKAGLSWEV YDDLRIRSTY SEAIRAPNIS ELFGAQSQNF FNVDDSCKSS
ELDNLANSEL RRQNCAALGI PTSFDSDYDS ASVDGFSGGN RELKAEESTS YTVGGVFQPS
FVDGLVLTVD YWNIKIDDAI SAVSAQDIID KCVDSPSGVN NEYCALITRD PNSHEITSIR
QYALNISSLE AAGIDFDIGY NFELFGGDLR SNLIATKLLK RRDYSFQDEP DVYENYVGVV
GTPEWQANLT FNYSWNSWQA TWRTRFIEGV SLYTDQELAV NANPNSLLSY GDYYISDMGI
GYNFDNGIEL KVGVDNLFNK DLPYGSTGTT AGSAAYDNIG RFFYTTISFS L
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