Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0094 |
Symbol | |
ID | 4250973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 102895 |
End bp | 104802 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116636 |
Product | hypothetical protein |
Protein accession | YP_732232 |
Protein GI | 113968439 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACC CGATGAAAAG AATAATAAAT GCTTTAATGC TGGCCATGTT AGCAACGGGC TGTAGCGATC CAAACCCAAC ACAGACCAAT CAAACCGCTG AGCAGGCCAA GGCCGAAAAG GCCGTCCAAA TATTGAGCCT CAAGCAACAA CTTGCGCCAA TCACCCAGCG TTATTTTGCC CTTAGACCGG AAATCGCCAC CTATTATGGC GTGGCAGAGG ATGAAGCGGG CAAGGATGTG CTTTCTAAGC TGACCGATTA CAGCCCATCG GGGGAAAATC ATCGCCGTAA AGCGCTTAAG GCCATATTAA CTGAACTCAA TGCTATCGAT GCCAGCCAGC TTAGCGCCTC GGAGCAAGTG AGTTTAGGCT CGATAAAATC TGAAATCGCC GGCGCATTGC TGCCAGCCGA AACCGTGGCC TATGGCACTA TGCTCGGTGA ATACGGCGTT TGGTTTTTAC CATATGTCGT CAACCACTTA TCTGGATTGC ATGTTGAATT TCCTGGGTAT ATGGAAGATA AGTTTGCGGT CACCACCCCA GAGCAAGCTA AGGCCTATCT CAACCGCTTA ACCATGTATC CTGCCGCCAT GGGCACAGTT ATCGATAAGT TGGATCAAGA TGTGCAAATG GGCGTGATCC CACCCGATTT TATTATCGAT AAGACCATAG CCGTGTTGCA GCAACAATTA GTGCACCATG CTAATGAGCA TCCCTTAGTC AGCAGTTTTA AAGCCAAATT AACCACCGCC CAAGTACCAG AAAGTGAGGC GTTGGCGAAC TCTGCCGCCG AACTGGTGGA GACAAAATAT TACCCTGCGA CGCGCCAGTT GATTTCCGCA CTGCAAGCCG TGCGCCTCAA GGCCACCCAT GTGGCGGGAC TCGGACACCA ACCTCAAGGC GCTAAACTCT ACAAGGCGAT GATTAAGCAC CTCGCCAATT CGGAGGTGAC CCCAGATGAG ATCCACCAAC TGGGATTAGA CGAAGTTGCC CGCATTACCG CCGAGATGGA TGTGTTACTC AAACAAGTGG GTTACCGCAA AGGCACAGTT GGCGAGCGCA TGCAGCGATT GCTCAAGGAT CCTAAATATA TCTACCCTAA TACCGCCGAG GGCAAACAGC AGTTAATGTC GGACATTCAC GGCTATCTGG CGAAAGTGAA CGCCAAATTA CCGTTGTGGT TTGGACTGTT ACCGAATCAA GAGGTTGCGG TTGAAGCCGT GCCAGACAGT CGCGCCGCCG CAACCAGCGG TGCATTTTAC GATGCGCCTT CTCAAGATGG TTCGCGTAAG GGCACCTTCT GGATAAGCCT GTACGATATG GCGGCGCTGC CCTCCTATTC GCTGCAAACC TTAACCTACC ACGAGACCAA TCCCGGCCAT CATCTACAGA CGCTCATCGG TCTGTCGGAT ACCTTGCCGC TGCTGAGTAC CATTTTTTAC TCTAATGCCG CGGGAGAAGG TTGGGCGCTG TATGCCGAGC GATTAGCCGC CGAGATGGGC ATGTATCAGG ATAATCCGAT TAACGACCTT GGCCGCTTGC AGTCTGAGTT ACATCGTGCG GTGCGCTTAG TGGTCGACAC GGGTATGCAT GCTAAGGATT GGAGCCGTGA GCAAGCCATT GATTATGCAG TGGCGACTGA GGGAATACAC CTCTCTGAAG CCACGGGCGA AATCGAGCGC TATGTGGTTT GGCCGGGGCA AGCCTTAGGT TACAAGCTGG GCGAGCTGAA AATTATCGAA TTGCGCACTA AGGCCAAAAA AGCCTTGGGC GATAAGTTTG ATATTAAAGT CTTCCACGAC AGGCTGCTTG AAAATGGCGC CTTGCCCTTA GATTTATTGG AGCAAAAGAT GGATCTGTGG CTCGAATCCG CTAAGGCGGC CAATGCCGCC GCCGAGACCA AGGTGTAA
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Protein sequence | MSNPMKRIIN ALMLAMLATG CSDPNPTQTN QTAEQAKAEK AVQILSLKQQ LAPITQRYFA LRPEIATYYG VAEDEAGKDV LSKLTDYSPS GENHRRKALK AILTELNAID ASQLSASEQV SLGSIKSEIA GALLPAETVA YGTMLGEYGV WFLPYVVNHL SGLHVEFPGY MEDKFAVTTP EQAKAYLNRL TMYPAAMGTV IDKLDQDVQM GVIPPDFIID KTIAVLQQQL VHHANEHPLV SSFKAKLTTA QVPESEALAN SAAELVETKY YPATRQLISA LQAVRLKATH VAGLGHQPQG AKLYKAMIKH LANSEVTPDE IHQLGLDEVA RITAEMDVLL KQVGYRKGTV GERMQRLLKD PKYIYPNTAE GKQQLMSDIH GYLAKVNAKL PLWFGLLPNQ EVAVEAVPDS RAAATSGAFY DAPSQDGSRK GTFWISLYDM AALPSYSLQT LTYHETNPGH HLQTLIGLSD TLPLLSTIFY SNAAGEGWAL YAERLAAEMG MYQDNPINDL GRLQSELHRA VRLVVDTGMH AKDWSREQAI DYAVATEGIH LSEATGEIER YVVWPGQALG YKLGELKIIE LRTKAKKALG DKFDIKVFHD RLLENGALPL DLLEQKMDLW LESAKAANAA AETKV
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