| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0089 |
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| Symbol | |
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| ID | 4250968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 98922 |
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| End bp | 99308 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638116631 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_732227 |
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| Protein GI | 113968434 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATC AAAGATATGT GCAGGGGCTC GCTAAACTAA CTGAAATAGA CGGTGAAGCG
GGTGAGAAAG TCATTCGCAG TCTTGCCGAT ATTTGCCCAG ACTTAGGCAA GTACATTATT
GAATATCCTT TTGGGGATAT TTATCAGCGT GAAGGACTCG ATCTTAAGAC GCGTGAGCTA
GTCACAGTTG CCGCACTCAC AGCGCTAGGG CATTGCCAGC CACAGTTAAA TGTACATATT
AATGGCGCAT TGAATGTTGG TTGTACACCG CAGGAAATTG TGGAGGTGAT ATTGCAAATG
TCTGTTTATG TTGGTTTTCC TGCAGCTCTG AATGGCATGT TTGTCGCTAA GACAGTATTT
TCCGAACGGG CGATAAGTGT CGTTTAA
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| Protein sequence | MSNQRYVQGL AKLTEIDGEA GEKVIRSLAD ICPDLGKYII EYPFGDIYQR EGLDLKTREL
VTVAALTALG HCQPQLNVHI NGALNVGCTP QEIVEVILQM SVYVGFPAAL NGMFVAKTVF
SERAISVV
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