Gene Shewmr4_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0088 
Symbol 
ID4250967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp98382 
End bp98738 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content47% 
IMG OID638116630 
ProductMerR family transcriptional regulator 
Protein accessionYP_732226 
Protein GI113968433 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA GTCAGTTTGC GGCGCTCACT GGATTGTCGG CGCATACGCT CAGATATTAC 
GAGAAAATTG GTCTACTTCA GTCTGTGGTG CGAAATGGCA GCGGGCATCG TGATTATTCG
GCGAAAGAGG TGGAATGGAT TGGATTTATT AATCGCTTAA AAGAAACGGG TATGCCGTTA
AAGCAGATAT TGACCTATGC AGACCTGCGT GCCCAAGGCG ATGCTACCGC TAGTCAGAGG
CAGCAATTGC TCGAGCAACA TGCTACCCAA TTGGCTGAGC GTATTCGCCA AGAGCAGGAG
CATCTGCTTG CCCTCAAGCA AAAAATTCAC TATTACCAAG ATCATTTCAG TGGTTAA
 
Protein sequence
MNISQFAALT GLSAHTLRYY EKIGLLQSVV RNGSGHRDYS AKEVEWIGFI NRLKETGMPL 
KQILTYADLR AQGDATASQR QQLLEQHATQ LAERIRQEQE HLLALKQKIH YYQDHFSG