Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0088 |
Symbol | |
ID | 4250967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 98382 |
End bp | 98738 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638116630 |
Product | MerR family transcriptional regulator |
Protein accession | YP_732226 |
Protein GI | 113968433 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTA GTCAGTTTGC GGCGCTCACT GGATTGTCGG CGCATACGCT CAGATATTAC GAGAAAATTG GTCTACTTCA GTCTGTGGTG CGAAATGGCA GCGGGCATCG TGATTATTCG GCGAAAGAGG TGGAATGGAT TGGATTTATT AATCGCTTAA AAGAAACGGG TATGCCGTTA AAGCAGATAT TGACCTATGC AGACCTGCGT GCCCAAGGCG ATGCTACCGC TAGTCAGAGG CAGCAATTGC TCGAGCAACA TGCTACCCAA TTGGCTGAGC GTATTCGCCA AGAGCAGGAG CATCTGCTTG CCCTCAAGCA AAAAATTCAC TATTACCAAG ATCATTTCAG TGGTTAA
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Protein sequence | MNISQFAALT GLSAHTLRYY EKIGLLQSVV RNGSGHRDYS AKEVEWIGFI NRLKETGMPL KQILTYADLR AQGDATASQR QQLLEQHATQ LAERIRQEQE HLLALKQKIH YYQDHFSG
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