Gene Shewmr4_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0084 
Symbol 
ID4250963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp96352 
End bp96816 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID638116626 
Productthioesterase superfamily protein 
Protein accessionYP_732222 
Protein GI113968429 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG CAATGGAAAG TCCAACACTA AGTCCAATGG AAAAGTTTCT CGCACAGCAC 
CCTATAGTGA CCGAAATCCC CGTGGCTTGG GGCGAAATGG ATGCGCTGCA ACACGTCAAC
AACGTGGTCT ATTTCCGCTA TTTTGAAACC GCACGTATCG ACTTTTTCAA CCGCCTCTTT
CCACTCGATG CCCTGTATAA ATCCGGTGTT GGTCCAGTGA TTAGCGAAAA TCAGGCCCGC
TATAAACGTC CAGTAACCTT CCCCGATACG CTATTGGTCA GCGTGAGTAT CAGCGATATT
CAAAGCGACA GATTTACCAT GCATTATCAG GCCTTTAGTA AGCAGCAACA GGCCATAACG
ACCTTAGGTT CTTCGGTCGC TGTGATGTTT AACTTTAAAA CAGGCCAAAA AGCCGAGCTT
CCCACGGAAT TACTCGCCAT TCTTAAACAA CACGAGCAAG CTTAA
 
Protein sequence
MSNAMESPTL SPMEKFLAQH PIVTEIPVAW GEMDALQHVN NVVYFRYFET ARIDFFNRLF 
PLDALYKSGV GPVISENQAR YKRPVTFPDT LLVSVSISDI QSDRFTMHYQ AFSKQQQAIT
TLGSSVAVMF NFKTGQKAEL PTELLAILKQ HEQA