Gene Shewmr4_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0081 
Symbol 
ID4250960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp94772 
End bp95320 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content51% 
IMG OID638116623 
ProductHPP family protein 
Protein accessionYP_732219 
Protein GI113968426 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT ACTTCACCCG AATGCGTTCT AAGGACATCT GTCCGCCACG ACAACCCCTG 
AAAAAGATCG TTTGGTCATG GATAGGGGCC TTTTGTGGTA TTTATTTAGT CGCCAGTCTC
GCCACTTATA TGGGCGAACA TCTGCTCGGC ACTATGTTTG TGATTGGCTC ATTTGGAGCG
TCGGCGGTAT TAGTCTATGG TGCGCCGCTA GCAGAGTTTT CTCAGCCACG TAACTTGATT
GGCGGCAGTG TGCTATCGGC ACTGATTGGT GTGGCTGTTT ATCAAGTGTT TGCCGATTAT
ATGGTGCTCG CGAGTGCGCT AGCCGTATCA CTCGCCATCG CATTGATGTA TTTAACTCGC
ACGCTGCATC CACCGGGCGG CGCAACGGCG TTAATTGCTG TGATAGGCGG TGAGAACGTG
CATCAACTCG GGTATCTCTA TGCGTTGATG CCAGTCTTTC TCGGCACATT GCTGCTATTG
CTGGTGGCGC TGGTAGTGAA TAACCTCTCC ACCGATCCCA AACGCCACTA TCCAGTGTAT
TGGATTTAG
 
Protein sequence
MRFYFTRMRS KDICPPRQPL KKIVWSWIGA FCGIYLVASL ATYMGEHLLG TMFVIGSFGA 
SAVLVYGAPL AEFSQPRNLI GGSVLSALIG VAVYQVFADY MVLASALAVS LAIALMYLTR
TLHPPGGATA LIAVIGGENV HQLGYLYALM PVFLGTLLLL LVALVVNNLS TDPKRHYPVY
WI