Gene Shewmr4_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0080 
Symbol 
ID4250959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp94244 
End bp94654 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content50% 
IMG OID638116622 
Productthioesterase superfamily protein 
Protein accessionYP_732218 
Protein GI113968425 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCA CCGAATACAG CCTCGAAATC CACCCAAGAT TTACCGAAAC CGATGGTCTA 
GGCCATATCA ACAACACAGT GATCCCCGTG TGGTGTGAGG CGGCGCGCAC GCCAATCTTC
GAGATTTTTA ATCCCGAGTT GGATTTGCAT CAGTGGAACC TCATAGTGGC AGGCTTTACC
GTGGCCTTTA TCGCACCGAC TTATTACGGC AAGAGTGTGA CGGTGAAAAC CTATGTCAGC
CGTATCGGCA ATAGCAGCTT CGAGCTGACT CAAACCTGTT GGCAGGCTGG CAATAAAACC
GCCGAAGTGA AAACCACGCT GGTGCACTAC GATTACAGCT GCGAGAAGAG TCGTCTCATC
CCGGAAGATA TTCGTGAAAT CTTAGCTAGC CTGAATGGTG AAGCTGCTTA A
 
Protein sequence
MSVTEYSLEI HPRFTETDGL GHINNTVIPV WCEAARTPIF EIFNPELDLH QWNLIVAGFT 
VAFIAPTYYG KSVTVKTYVS RIGNSSFELT QTCWQAGNKT AEVKTTLVHY DYSCEKSRLI
PEDIREILAS LNGEAA