Gene Shewmr4_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0076 
Symbol 
ID4250955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp87414 
End bp88277 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content54% 
IMG OID638116618 
ProductABC transporter related 
Protein accessionYP_732214 
Protein GI113968421 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAG ACTGTACCCC AATACTAGAG TTTTCTAACG TAAACAAAGT GTTTCGTGGC 
AAAGGTGCCA GCGAAAAACG TGCGCTCAAG GATCTGACCT TACGTTTATC GGCCGGTATG
GTGGTCGGTC TATTGGGACA AAACGGTGCG GGTAAATCGA CCCTAATGCG CTGCGCCTTG
GGGATCCTCT CGCCGGATTC GGGCGAAATC TGCACCTTAG GCGAAACGCC GGAGCAGCTT
TCTTCTGCCG CTAAGGAACG CTTAGGCTAT GTTCCGCAGC AACCTTTTGG TTATGAAGGC
TTTACCGTCG AGCGCGCCCT CGATTTGCAC CGCAGTTTTT ATCCCCACTG GGACATGCAG
TTAGAGCAGG ATTGGCTCAC CCGCTTCGAA TTAGATGTCA CTCAACAGGT ACAACGCCTG
TCCGTTGGTC AGCGCCAATC CTTGGCCTTG ATCATGGCGA TGGCCTATCG CCCCGAGTTG
CTGATCCTCG ATGAACCCGT GGCTAGCCTC GACCCGATAG TCAGACGCAA GTTTATGGTC
GATTTGTTCG ACTTAGCCCT CGAATCCGGC TCGGCCGTGT TGTTTTCATC CCATATCACC
TCAGATTTAG AACGGGTCGC GAGCCATGTC GCCCTGATTA AACAGGGCGA GTTAGTGCTG
TTTAAGGAGA TAGATGCCCT GCGGGAAGAG GTGCGTTTAG TCAAACTCGC GGAGGGCGCC
GAGTTACCTG AGCAGGTGCG TATCCTCAGC CGCGATGGCG ATTCTGTACT GGTGGATAGG
GGCGATGTGG AGCTTAATTT GCGCGGCGTG CAGCGCAGCG AAGCGCTGAA TTTAGAACAA
CTCTTTGTGG AGCTGCACAA ATGA
 
Protein sequence
MDQDCTPILE FSNVNKVFRG KGASEKRALK DLTLRLSAGM VVGLLGQNGA GKSTLMRCAL 
GILSPDSGEI CTLGETPEQL SSAAKERLGY VPQQPFGYEG FTVERALDLH RSFYPHWDMQ
LEQDWLTRFE LDVTQQVQRL SVGQRQSLAL IMAMAYRPEL LILDEPVASL DPIVRRKFMV
DLFDLALESG SAVLFSSHIT SDLERVASHV ALIKQGELVL FKEIDALREE VRLVKLAEGA
ELPEQVRILS RDGDSVLVDR GDVELNLRGV QRSEALNLEQ LFVELHK