| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0072 |
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| Symbol | |
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| ID | 4250951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 83337 |
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| End bp | 84476 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638116614 |
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| Product | transport protein, putative |
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| Protein accession | YP_732210 |
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| Protein GI | 113968417 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.177811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA TCATCGCAAT GGTTCGCAAG GAACTGATAG ACGCCGCCCG CGATAAACGC
TCTGTGATGG CGGGCCTCTA CTACGCCATC GGCACGCCGC TGATCATGTG TGGCCTGTTT
ATGGTGCTTA TCGGCCAACT GACCAGCCCG GACGATCTCA AAATCAGCAT CACTAACCCC
GACAAAGCAC CTGACTTAGT GAGATTTTTG TCCAACAAGG GCATTACCCA AGGTGAAGCT
GGCGCTAAGG ATCTGAAAGC CATCGAGCTG ATTATCAGCC CCGACTATGC CAAGCAGATG
AACCAAGGCA AAGGCGCCGA AATCACTATC GTGGCCGATA ACTCAGAGGA AAAACTGCAA
AACTCGATTC GTCGCTTAGA GAAACAGTTG CAGGCCTACA GCGCCGAAAT GGGCAGCCTA
CGCTTAATCG CCCGTGGCAT CGACCCTCGA GTGGTGCAGC CACTGAAAGT GAATGTGCAT
GACCAAGCCA CGACCGACTC TAAGGGCGGG ATGATTTTAG GCATCGCCAT TTTCACTATG
ATTTATTCAG TGTTTATCTC GGGGATGAAT CTGGCCATCG ACACCAGCGC CGGTGAGCGT
GAGCGCAACT CCTTGGCATT GTTACTCAGC CATCCGCTGA CCACACGCCA GTTAGTGCTC
TCGAAAATCA TCGCCGTCGG CCTGTTTGCC CTGCTCGGCT TAGTGTTGAT TTTACTGGTG
TCTAAGGTCG CCTATACCTT CGTGCCTTGG CAGGAACTCG GCTTTAGCGT CAGCATCACC
AATGAGTTTA TGGCGCTAAT GCTGCTGGTC GGTATTCCCG TCGCGCTGAT GGCCGCCTGT
CTGCAATTGT TTGTGTCCTT TATGGCCAAA ACCTTTAAGG AAGCCCAGTC CTACCTGACC
ATGGTGTTGT TTGTGCCCTT GGCGCTATCG ATGGCGGCCA GCTACAACAT AGCGCCGGAC
ATTCTGCAAT GGTTGCCCGT CTCCGGTCAG CAACAGGCGC TGATGGACTT TATCAAAGGT
AAGGACATGA GCATGCTGCA ACTGCTGGTA TCGACGCTCG ACACCCTAGC CATCGCCCTC
GTCTTGGCGC TTGGTATGGA AAAATCCTTA AAGAGTGAAA AAGTGGTCTT CGGCTTATAA
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| Protein sequence | MNKIIAMVRK ELIDAARDKR SVMAGLYYAI GTPLIMCGLF MVLIGQLTSP DDLKISITNP
DKAPDLVRFL SNKGITQGEA GAKDLKAIEL IISPDYAKQM NQGKGAEITI VADNSEEKLQ
NSIRRLEKQL QAYSAEMGSL RLIARGIDPR VVQPLKVNVH DQATTDSKGG MILGIAIFTM
IYSVFISGMN LAIDTSAGER ERNSLALLLS HPLTTRQLVL SKIIAVGLFA LLGLVLILLV
SKVAYTFVPW QELGFSVSIT NEFMALMLLV GIPVALMAAC LQLFVSFMAK TFKEAQSYLT
MVLFVPLALS MAASYNIAPD ILQWLPVSGQ QQALMDFIKG KDMSMLQLLV STLDTLAIAL
VLALGMEKSL KSEKVVFGL
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