| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0067 |
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| Symbol | |
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| ID | 4250946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 79878 |
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| End bp | 80837 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116609 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_732205 |
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| Protein GI | 113968412 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000323678 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGTAT TACTCAGTTT CGGTGAGGTG TTAGTGGATT TATTGCCCAC AGATATTAGC
GGCAAGTCCC ATCAAGCCAT TGCGGGCGGC GCGCCTGCAA ACGTGGCTGT GGGTTATGCC
AAACTGGGGG GCAAGAGTTA CTTTGCCGGC GGCATCAGCA CCGATGATTA TGGGGCTATG
TTAAAACAAG CCCTAGCGAA TGAAGGGGTT GTAACGGATT ACTTGACCCA AGTGCCGGAG
GCGCCAACGG CGACTGTGGT GGTTAATTTG GATGAGCATG GCGAACGGAC CTTTGAGTTT
AACCGCCAAG GGACTGCCGA TCTTTGCTAT AGTCAGCGCC ATTTTGATGC CATTCCATGG
CAACAGATGG ATATTTTCCA TCTCTGCTCC AATACCTTTA CCGAAGCGAG CATTTTTAAC
GCGAGTCTCT ATGGCGCTCG TTGTGCGAAT TCATTCAATA AGATAGTGAG TTTTGATGTT
AATTTGCGCT TATCGCTCTG GCCCGATACC GCATTGCTTG CTGAGCGGGT TGAGCAGTGT
TTTCGTTACA CACAAGTGCT GAAAATGAGC CGTGAAGAGG CTGAGTATTT AGCGTTAACG
CGGAATAAGA GTTTTGAAGA TTATTTGCAG TTTTGTTTGG CGCAAGGTGT TGAAGTTATT
CTGATTACTG ACGGCGCCAA TCCAGTGCAA TGCATCACAG TGAATGAACG ATTTAGCGTG
CCAGTCCCAC AAATTAAAGC CGTTGATACC ACGGCGGCGG GCGACAGCTT TATGGCGGGT
TTTTTGTTTG CGCTAGGTTC TGAGTTAGCG TTTGATCTCG AGCATCTAAC CTTAAAACAT
CGACTCGCAT GTCAGACACA GTTGCGCAAG GCGATTGAGT TTGCGGTGCG TTGCGGCGCC
GTAACCTGTG GGCAGAAGGG CGCTTTCCCT GCCTTGCCCA CATTGTCACA GGTGAGTTAA
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| Protein sequence | MTVLLSFGEV LVDLLPTDIS GKSHQAIAGG APANVAVGYA KLGGKSYFAG GISTDDYGAM
LKQALANEGV VTDYLTQVPE APTATVVVNL DEHGERTFEF NRQGTADLCY SQRHFDAIPW
QQMDIFHLCS NTFTEASIFN ASLYGARCAN SFNKIVSFDV NLRLSLWPDT ALLAERVEQC
FRYTQVLKMS REEAEYLALT RNKSFEDYLQ FCLAQGVEVI LITDGANPVQ CITVNERFSV
PVPQIKAVDT TAAGDSFMAG FLFALGSELA FDLEHLTLKH RLACQTQLRK AIEFAVRCGA
VTCGQKGAFP ALPTLSQVS
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