Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0064 |
Symbol | |
ID | 4250943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 74168 |
End bp | 75652 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638116606 |
Product | sucrose phosphorylase |
Protein accession | YP_732202 |
Protein GI | 113968409 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000722293 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAATC AAGTGCAATT GATCACCTAT GTCGATCGGA TAACCGGTGC CGGACTCAAA CAACTCAAAG CCTTACTCGA TAATGAGTTA GATGGTTTAT TTGGGGGCGT TCATCTACTG CCCTTTTACT ATCCCATCGA TGGCAGCGAT GCGGGGTTTG ATCCCATAGA CCATGTACAA GTGGACTCAC GCTTAGGTGA TTGGGACGAT GTCAAAAACA TAGGCGAAGC GTTCGACATC ATGGCCGACT TGATCGTTAA CCACATGTCC GCAGAATCTC CCGAGTTTAA AGATGTGCTC AAGCATGGCA AACAATCGGT TTACTGGGAT TTATTCCTGA CCAAGGACAA GGTATTCCCT GAGGGATTAA GTGAACAGGA TCAAAAAGCT ATCTATCGCC CCCGCCCAGG GAGCTGCTTT AGCACTTACA CCTTAGCGGA TGGTTCAACG GAAGAATTTT GGACCACCTT TACCCGTAAC CAGATCGATA TCGATGTTAA CTCAGCTGCA GGTAAGGATT ATTTAAACCG CGTATTGGCG CGATTTAACC ACAGCAAAGT CAATTTAATC CGCTTAGATG CCGCAGGGTA TGCAATCAAA AAGCCCGGTA CTAGCTGCTT TATGATTGAG GAATCCTTCG AGTTTGTGGA TAAATTAGCG AAGCAAGCTA ATGAGTTAGG TATGACAACC CTAGCCGAAA TCCACTCCCA TCATATGACG CAAATCGATA TCGCCAAACG AGTGGACATG GTTTACGACT TCGCCCTGCC ACCGCTCATC CTGCACACGC TGTTTAGCCA AGATTGTAGC GCCCTGAGTC ACTGGCTAGA CATGGCCCCT CGCAACTGCA TCACAGTACT CGATACCCAC GATGGCATTG GTATTATCGA TGTCGGCCCA ATGGATGGCT TACGCGGATT ATTGGACGAA AAACAAATCG ATAATCTGGT CGAAACCATA CACGGCAACA GTCAAGGCGA GAGTCTACAA GCCACAGGGG CGGCCGCCAG CAATGTCGAT TTGTATCAAA TCAACTGCAC TTATTACGAT GCCCTAGGGC AAAATGATCT AGATTACTTG ATGGCGCGAG CAATTCAGTT TTTCGCACCG GGTATTCCGC AGGTCTACTA CACAGGCCTG CTTGCCATAC CAAACGACAT GACGTTGCTG AATCAAACCC ACGTCGGCCG AGACATTAAT CGCCCCTATT TAAACCGGGA AAAAGTGCAA CAAGCCCTGC AAAAACCTGT GGTTAAAGCC CTCATCCAAT TGATTAAACT GCGTAATAAG AGCGCAGCAT TCAATGGCCG CTTTTCGATG GCAGCAAGTG GAAAAACACT AACTCTCACA TGGTCTGCAC AAAATGCATC GGCCAGTCTT AGTCTCGACT TTGCCCATAA ACAAGGGCTG ATCACCCTAC TTGATGAGCA AGGCATCGAA ACCCAAATCG CATTAGCAGA CCTGCTCACT CAAGCACAGG CCTAA
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Protein sequence | MKNQVQLITY VDRITGAGLK QLKALLDNEL DGLFGGVHLL PFYYPIDGSD AGFDPIDHVQ VDSRLGDWDD VKNIGEAFDI MADLIVNHMS AESPEFKDVL KHGKQSVYWD LFLTKDKVFP EGLSEQDQKA IYRPRPGSCF STYTLADGST EEFWTTFTRN QIDIDVNSAA GKDYLNRVLA RFNHSKVNLI RLDAAGYAIK KPGTSCFMIE ESFEFVDKLA KQANELGMTT LAEIHSHHMT QIDIAKRVDM VYDFALPPLI LHTLFSQDCS ALSHWLDMAP RNCITVLDTH DGIGIIDVGP MDGLRGLLDE KQIDNLVETI HGNSQGESLQ ATGAAASNVD LYQINCTYYD ALGQNDLDYL MARAIQFFAP GIPQVYYTGL LAIPNDMTLL NQTHVGRDIN RPYLNREKVQ QALQKPVVKA LIQLIKLRNK SAAFNGRFSM AASGKTLTLT WSAQNASASL SLDFAHKQGL ITLLDEQGIE TQIALADLLT QAQA
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