Gene Shewmr4_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0064 
Symbol 
ID4250943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp74168 
End bp75652 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content48% 
IMG OID638116606 
Productsucrose phosphorylase 
Protein accessionYP_732202 
Protein GI113968409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000722293 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAATC AAGTGCAATT GATCACCTAT GTCGATCGGA TAACCGGTGC CGGACTCAAA 
CAACTCAAAG CCTTACTCGA TAATGAGTTA GATGGTTTAT TTGGGGGCGT TCATCTACTG
CCCTTTTACT ATCCCATCGA TGGCAGCGAT GCGGGGTTTG ATCCCATAGA CCATGTACAA
GTGGACTCAC GCTTAGGTGA TTGGGACGAT GTCAAAAACA TAGGCGAAGC GTTCGACATC
ATGGCCGACT TGATCGTTAA CCACATGTCC GCAGAATCTC CCGAGTTTAA AGATGTGCTC
AAGCATGGCA AACAATCGGT TTACTGGGAT TTATTCCTGA CCAAGGACAA GGTATTCCCT
GAGGGATTAA GTGAACAGGA TCAAAAAGCT ATCTATCGCC CCCGCCCAGG GAGCTGCTTT
AGCACTTACA CCTTAGCGGA TGGTTCAACG GAAGAATTTT GGACCACCTT TACCCGTAAC
CAGATCGATA TCGATGTTAA CTCAGCTGCA GGTAAGGATT ATTTAAACCG CGTATTGGCG
CGATTTAACC ACAGCAAAGT CAATTTAATC CGCTTAGATG CCGCAGGGTA TGCAATCAAA
AAGCCCGGTA CTAGCTGCTT TATGATTGAG GAATCCTTCG AGTTTGTGGA TAAATTAGCG
AAGCAAGCTA ATGAGTTAGG TATGACAACC CTAGCCGAAA TCCACTCCCA TCATATGACG
CAAATCGATA TCGCCAAACG AGTGGACATG GTTTACGACT TCGCCCTGCC ACCGCTCATC
CTGCACACGC TGTTTAGCCA AGATTGTAGC GCCCTGAGTC ACTGGCTAGA CATGGCCCCT
CGCAACTGCA TCACAGTACT CGATACCCAC GATGGCATTG GTATTATCGA TGTCGGCCCA
ATGGATGGCT TACGCGGATT ATTGGACGAA AAACAAATCG ATAATCTGGT CGAAACCATA
CACGGCAACA GTCAAGGCGA GAGTCTACAA GCCACAGGGG CGGCCGCCAG CAATGTCGAT
TTGTATCAAA TCAACTGCAC TTATTACGAT GCCCTAGGGC AAAATGATCT AGATTACTTG
ATGGCGCGAG CAATTCAGTT TTTCGCACCG GGTATTCCGC AGGTCTACTA CACAGGCCTG
CTTGCCATAC CAAACGACAT GACGTTGCTG AATCAAACCC ACGTCGGCCG AGACATTAAT
CGCCCCTATT TAAACCGGGA AAAAGTGCAA CAAGCCCTGC AAAAACCTGT GGTTAAAGCC
CTCATCCAAT TGATTAAACT GCGTAATAAG AGCGCAGCAT TCAATGGCCG CTTTTCGATG
GCAGCAAGTG GAAAAACACT AACTCTCACA TGGTCTGCAC AAAATGCATC GGCCAGTCTT
AGTCTCGACT TTGCCCATAA ACAAGGGCTG ATCACCCTAC TTGATGAGCA AGGCATCGAA
ACCCAAATCG CATTAGCAGA CCTGCTCACT CAAGCACAGG CCTAA
 
Protein sequence
MKNQVQLITY VDRITGAGLK QLKALLDNEL DGLFGGVHLL PFYYPIDGSD AGFDPIDHVQ 
VDSRLGDWDD VKNIGEAFDI MADLIVNHMS AESPEFKDVL KHGKQSVYWD LFLTKDKVFP
EGLSEQDQKA IYRPRPGSCF STYTLADGST EEFWTTFTRN QIDIDVNSAA GKDYLNRVLA
RFNHSKVNLI RLDAAGYAIK KPGTSCFMIE ESFEFVDKLA KQANELGMTT LAEIHSHHMT
QIDIAKRVDM VYDFALPPLI LHTLFSQDCS ALSHWLDMAP RNCITVLDTH DGIGIIDVGP
MDGLRGLLDE KQIDNLVETI HGNSQGESLQ ATGAAASNVD LYQINCTYYD ALGQNDLDYL
MARAIQFFAP GIPQVYYTGL LAIPNDMTLL NQTHVGRDIN RPYLNREKVQ QALQKPVVKA
LIQLIKLRNK SAAFNGRFSM AASGKTLTLT WSAQNASASL SLDFAHKQGL ITLLDEQGIE
TQIALADLLT QAQA