Gene Shewmr4_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0059 
Symbol 
ID4250938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp69156 
End bp69776 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content37% 
IMG OID638116601 
Producthypothetical protein 
Protein accessionYP_732197 
Protein GI113968404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0155929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.2316e-08 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTCAAAA ATACTGCAAA ATTTTTTGTT ATTTTTTCCG TTTTATTTCT TTCAGGTTGT 
GCACAAGTCT TAACTGCCGA ACAATCGGCC CCTGAGATCA ATTTCAGTGC AGCAGAAAAA
CCACTCACAA TCGCGGTTAT CGACAAACGT GAATACGTAA TTGATAATGA CAAAACACCA
GCTTTTGAAG GACTTATTCG CAGTGGCTTT GGTATCCCCT ACTCTTATAA CACTCCCACA
AATGAGGCAA TGTCTGTTTA CCTATCCAAC AGACTTGTCG CAGGTTTCAA TAAGAAAGGA
ATTAAGGCTG AATCAGTTGA AACCTCACCT AAGATGAGTA TCGATGCAGC GGTTACCCAA
GTCAGCAATA AGGGTAATAA ATCGATTATT TTCATTTTAA ATGAGTGGAA ATATGATTAT
CACACATTAT CAGATAATTC GTGGTACAAC CTTGACCTGA TGATCATTGA TGAAAATGGC
ACAGAGAAAC TCGTCAAAAA CTTCACTGGT GAAAATGATA TTCCTGAAGG CGTAATCGTA
AATGAAATGC AACTAATTTA TAAACAACGC TTCGAAGCTA TATTTAAAGA TGCTGAAGTA
ATTCAGGCCT TAAATCTATA A
 
Protein sequence
MFKNTAKFFV IFSVLFLSGC AQVLTAEQSA PEINFSAAEK PLTIAVIDKR EYVIDNDKTP 
AFEGLIRSGF GIPYSYNTPT NEAMSVYLSN RLVAGFNKKG IKAESVETSP KMSIDAAVTQ
VSNKGNKSII FILNEWKYDY HTLSDNSWYN LDLMIIDENG TEKLVKNFTG ENDIPEGVIV
NEMQLIYKQR FEAIFKDAEV IQALNL