| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0054 |
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| Symbol | |
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| ID | 4250669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 62634 |
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| End bp | 63680 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116596 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_732192 |
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| Protein GI | 113968399 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000245191 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTTTG CAAACACAGC CTCCATCAAC CAATACTTGC GCACGCATCC CGCGTTATTT
ACCGCCATGC TGTTAGTGAT TGCTCTGCTC ACTAGCTATT TGATTGATCA CTTTTCAGGC
TCGGCCATTG CCGTACTGCT TATCCTGCAA TTAGCCGTGG TCGCCGTGGC CCTGCAATGC
AGCGCCAACT ACGCCTATTT TGTGGCCGTG TTTGGCGCCG TCAGTTTCAA TTTTTTATTC
ACCACGCCGC GCTATTCGTT GCAGATGTTC AACGTCGAAG ACATAGTCAA TCTAAGCGTG
TTTTTGCTGG TCGCCCTCAC TAGCAGCAAG TTAGCCGAAC ATTACCGCCG CCAGCAGCAG
GCACTCGAAC AGGCACAGCT CAGAAACAGT ATTTTACTCT CGGTCTCCCA CGATTTACGC
ACGCCGCTTG CGACCATTAT CGGCACCTTA ACCACGCTGA AGGAATACCA AGCTAAACTC
AGTCCTGAGC AAAACGAGGA GCTTATTGAC TCGGCCGCCG CCGAGAGTCA TCGCCTGCAC
CAATATATCG AAAACCTCTT GCAGGCGACC AAGTTACAAC ACGGTGCGCT CAAATTTAGC
CTAGACGAAG CCAATCTACG CGAAGTGTTA CAACGCACTA TTGCCCGCTT TCAAACCGCG
CAACCTAGGA TCCAAATTCA TAGTGAGCCA GAACTTCCGC CATTAATGAT TTGTAGCTCT
TTGATTGAAC AGGCGATTTT CAATGTGCTC GACAATGCCC TGCGCTACTC GCCCGCAGAA
CTGCCTGTTA CGGTAAATCT GTACCGCCAC CAACAACTGC TGCGCATCGA TATTCAAGAC
TTAGGACAGG GCATAGCGCC AGCCGACGCC GAGGCCATTT TCGAACTGTT CTATCGTCAA
CATCCCTCGA CCGATGGCGG TGCGGGATTA GGCCTTGCGG TCGCCAAAGG CATTATTACC
GCCCACAGGG GCAGCATCGG CGCCGAAAGC GTTGCCCAAG GCAGCCTGAT CCGCATCGCC
TTACCCATAA CCACGGAGGC GGCATAA
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| Protein sequence | MTFANTASIN QYLRTHPALF TAMLLVIALL TSYLIDHFSG SAIAVLLILQ LAVVAVALQC
SANYAYFVAV FGAVSFNFLF TTPRYSLQMF NVEDIVNLSV FLLVALTSSK LAEHYRRQQQ
ALEQAQLRNS ILLSVSHDLR TPLATIIGTL TTLKEYQAKL SPEQNEELID SAAAESHRLH
QYIENLLQAT KLQHGALKFS LDEANLREVL QRTIARFQTA QPRIQIHSEP ELPPLMICSS
LIEQAIFNVL DNALRYSPAE LPVTVNLYRH QQLLRIDIQD LGQGIAPADA EAIFELFYRQ
HPSTDGGAGL GLAVAKGIIT AHRGSIGAES VAQGSLIRIA LPITTEAA
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