Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0051 |
Symbol | |
ID | 4250666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 59838 |
End bp | 61199 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116593 |
Product | TrkH family potassium uptake protein |
Protein accession | YP_732189 |
Protein GI | 113968396 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000243033 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTTCAAT GGCATCCTTC GCTCACCCTA GAGCACACAC CTAAAAGCGG TAAAAAACTC TTTGGCGCGC CGCCCTTTAT CTTAAGTGTC AGTTTTGCTC TGCTGATCTT ACTTGGCACT TGCTTGCTTA AACTGCCTAT CGCCACCGAG TCGCCTATTA CTTGGCTGCA AAGCCTCTTT ACCGTGACCT CGGCGGTGAC GGTCACAGGG CTTGTGGTCG TCGATACTGG CAGTATGTTC ACGCCCTTTG GCCAAGTGAT TATCGCGCTG TTAATTCAAT GCGGCGGCCT AGGCTTGATG ACCTTTGCCA TAGTCACGCT AATAGCGCTG GGCGGTAAGA TAGGTTTCTT GCAGCAAACA GTGGCGAAAG AAGCGTTTAA TCAAACCGAT ACCTCTACCT TAGTCTCGAC TGCTAAGGCC GTACTGGTGT TTTCGCTATT GGTTGAAGCC GTGGGTATGC TGATTTTATC TGTCTACTGG AGCGGCGAAT TGGGTTGGCA AACTAGCTTA TTTCATGGCT TCTTTTATAC TATTAGCGCC TTTAATAACG CGGGTTTTGC CCTAAGCCCA GATAGCTTAA TCCCCTATGT GGCCGACCCA GTCGTTAACC TCACCATCAC AGGTTTATTT ATTGTGGGCG GCCTTGGGTT TTCGGTGTGG ATTGACCTTA AGCGCAATAA ACGTTGGTCG AAACTCACCG TCTACAGCCG CATGATGATT ACTGGCACCA TACTGATCAA TGCCGTGGCC GTGATAGCCA TTTACCTGAT TGAATACAAC AACCCCAACA CCCTCGCGCC CTTAAGCGAG CTCGGCAAAT GGTTGGCCTC TTGGTTTCAA GCCGTGACCC CGCGCACCGC AGGCTTTAAC ACCTTGCCCA TAGACCAACT CGAGGATGGT TCCACCCTAT TGATTTTAGT GCTGATGTTT ATCGGCGGCG GCTCCCTCAG CACCGCCAGC GGCATTAAAG TCGTGACCTT TATGGTGCTT ATTCTCGCCA CCTACGGCTA TTTACGCCGC GATGAAGCAG TGTATGTGTT TAAGCGGGAA ATCCCCAAAG ATACCGTCAG CAAAGCCTTA GCGCTAACCA TCATCTCTTT GGTCGTATCT TGGCTGGCCA TCTTCATATT GGTATTAAGC GAGAAAGCGC CGTTAGTCGA TATCGTCTTC GAGGCCATAT CCGCACTGGG CACAGTCGGT TTATCCCGCG GTTTGACAGG TAACTTAACT AGCCTAGGCC AAGCCATCAT CATCTTTATG ATGTTCATGG GTCGCCTCGG CCCACTGATG TTGGCCTACT TCCTTGCCAA CCCAAGGGTA AAAAAGCTGC GCTATGCAGA AACCAAATTG GCAATTGGGT AA
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Protein sequence | MVQWHPSLTL EHTPKSGKKL FGAPPFILSV SFALLILLGT CLLKLPIATE SPITWLQSLF TVTSAVTVTG LVVVDTGSMF TPFGQVIIAL LIQCGGLGLM TFAIVTLIAL GGKIGFLQQT VAKEAFNQTD TSTLVSTAKA VLVFSLLVEA VGMLILSVYW SGELGWQTSL FHGFFYTISA FNNAGFALSP DSLIPYVADP VVNLTITGLF IVGGLGFSVW IDLKRNKRWS KLTVYSRMMI TGTILINAVA VIAIYLIEYN NPNTLAPLSE LGKWLASWFQ AVTPRTAGFN TLPIDQLEDG STLLILVLMF IGGGSLSTAS GIKVVTFMVL ILATYGYLRR DEAVYVFKRE IPKDTVSKAL ALTIISLVVS WLAIFILVLS EKAPLVDIVF EAISALGTVG LSRGLTGNLT SLGQAIIIFM MFMGRLGPLM LAYFLANPRV KKLRYAETKL AIG
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