Gene Shewmr4_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0050 
Symbol 
ID4250665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp58053 
End bp59630 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content38% 
IMG OID638116592 
Producthypothetical protein 
Protein accessionYP_732188 
Protein GI113968395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.92691e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATACAA ATAAACCTTT AAGATTTTTT GATTTTTCTT CTGCAGATAA TCCGCTCGTT 
GAAATTCAGA GGAGATTGGG ATCTCAACAG TCTCGTTATG TATCTAAGTA CTTGAATTTT
TTGGGTGCAA AAAAAGTATT AGTTGAGGAT AATTACTTCG ACAGGGACTA TCTTAATGAA
TTCTCCGCAT TTTATAGTCT TAGTGCCAAA GGGTATCCAA ATATTTGTCA ACGCCTTCAT
TTTTTTTCTA CTATGCGGCT CGATAGAGAG TTGTTTGTTA GTGCGGTTGG AGGGGACGAA
AGTGCTATTG ATGAGCTTCA AAATGGTTAT TTAGGGTTTA TAGTTGTTAG GCCTATTACT
GATTCACCTT TTGGTAGAAC GGTGTTGAAG TGGTATCCAG ATCAAACACC GGGAACGCCA
AGAGTTACAC AACCATCTAG AGATTATGTA TGCAATGTTG CTGGACTAGA GTTTTGTGTT
CATGGATTGG CATGGCAGCA GCAAGATTCT GGCGTCGCTG CATGCGCTAC AATTGGTATT
TGGAGCATGC TTCACTCCTC AGCATTTAAT GAATGTAATG CCATCCCAAC AACATCAATG
ATAACTGAGG CTGCACATTC TTCTGCACTT GTAGGGCGTC CACCTTATCC ATCGCATTTC
CTTAGAATTG ATCAAATACA ACATGCGATT ATTCAACTTG GTTTTTCACC AGCCATAACT
AATGGTGAAT TAGTTGGCCA ATTCTTTACT ACTGCTCGGT TTGCAAATAC TTGCGCAGCA
TATCTTCGAT CTGGCTATCC TCTCCTAATT GGGGGCGTCC ATGGTGATGG TGTACCAGTT
GGTCATGCTG TTTGTGCTGT AGGATTTAGG GAGCCAGCTC CTCAACAAGG AGGTGGTATT
GCTGAGGTAT CTTTACAAGA TGATAATATT TCATACCTCT ATATTCACGA TGATAATATT
GGACCAAATG TTAGATTTAA ATTAATCACA CAAAAAGTCC ATGAAGGAAC TCCTGAAGAG
TTTGAACGCT GTGTTATGAA AATGGAGACT CCTGCTTACC TAAATGTTGG TGCGGCTGAA
AACCTTGATA ATACAACAAT TATACCTCAA TCCATTATTG CTGCTGTTCA TCCTGATCTT
AAAATAACTT CAGATAGTTT TTTTCGACAT GGTATATCTC TAACTGGAAG TTTACATGCC
GCATTAAAGG AATATACGGA AGGAATGAAT ATTGAACCAA CATCACTTGT TTTTAGCACT
CGTTTTGTGA TGTTGAAAGA TTACTTATCA ATTGAACTAA AGAGACAGTT AGGGAGCGAG
CCTGATTTAT TATCTAACAC TAGAATTCAG CTCCAAGAAA ATGTACCGCC AATGAGTCTA
CATTTAGCAT TACTTAGAAT TGCGATGCCA GATGCATCTG TATTAATTGA TGTTTTGTTT
GATACAACAG ATACGGACAA AAACAGATCT GTTTTTTGTC ATGTTGTATA TGACCTAACA
TTTGCGAATT TTCTAGACGT ACTACAGACT AATGTAAGAG AACGATTTTT AGGGGTGTTT
GTGAAAGCAT ATAAATAA
 
Protein sequence
MNTNKPLRFF DFSSADNPLV EIQRRLGSQQ SRYVSKYLNF LGAKKVLVED NYFDRDYLNE 
FSAFYSLSAK GYPNICQRLH FFSTMRLDRE LFVSAVGGDE SAIDELQNGY LGFIVVRPIT
DSPFGRTVLK WYPDQTPGTP RVTQPSRDYV CNVAGLEFCV HGLAWQQQDS GVAACATIGI
WSMLHSSAFN ECNAIPTTSM ITEAAHSSAL VGRPPYPSHF LRIDQIQHAI IQLGFSPAIT
NGELVGQFFT TARFANTCAA YLRSGYPLLI GGVHGDGVPV GHAVCAVGFR EPAPQQGGGI
AEVSLQDDNI SYLYIHDDNI GPNVRFKLIT QKVHEGTPEE FERCVMKMET PAYLNVGAAE
NLDNTTIIPQ SIIAAVHPDL KITSDSFFRH GISLTGSLHA ALKEYTEGMN IEPTSLVFST
RFVMLKDYLS IELKRQLGSE PDLLSNTRIQ LQENVPPMSL HLALLRIAMP DASVLIDVLF
DTTDTDKNRS VFCHVVYDLT FANFLDVLQT NVRERFLGVF VKAYK