| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0049 |
|---|
| Symbol | |
|---|
| ID | 4250664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 56321 |
|---|
| End bp | 57505 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638116591 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732187 |
|---|
| Protein GI | 113968394 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000378391 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAACATC ATGATGTAAT TATTATCGGA GCCGGCGCCG CAGGATTAAT GTGTGCTGCA
ACAGCGGGTT ACCGAGGTCG TGATGTACTG GTACTCGATA ATGCCAAGCA GGCTGGGCGT
AAAATCCTTA TCAGCGGTGG CGGCCGTTGT AACTTTACCA ATCTGAAAGT CGAACCCGCC
AACTTTATCT GTGGCAACCC GCACTTTGTC AAATCCGCAT TGGCGCGTTA TCCGTCGCAG
CAGTTTATCG AACTGGTTGA GCGCCACGGC ATTGAATACC ACGAGCGTGA CCATGGCCAG
CTGTTCTGTA ATGACTCGGC CAAAGAGATA GTCACTATGC TGCTGACCGA ATGTGAGTGG
GCTGGCGTGA GCATTAAACT TCGCACCGAT ATTCTGGCGG TGAGCAAAAC CGAGGCAGGC
CGCTTTGAGC TAAACACCTC AAATGGCGAG TTAAGTTGCG ACTCCTTAGT GATCGCCACC
GGCGGTTTAT CAATGCCAAA ACTCGGCGCC ACACCCTACG GCTATCAATT GGCCGAGCAG
TTTGGGCTTA AGGTGTTGCC AACTCACGCG GGTCTGGTGC CTTTTACTTG GCACAGCGAA
GATAAAATTC GCTTCGAACC GCTGTCGGGC ATTGCCGTAC CGAGCCGTAT TACCGCCAAA
GATGGCACCG CCTTTAGCGA AGCCTTACTC TTTACCCACA GAGGCTTATC TGGCCCCGCT
ATTTTGCAGA TTTCCAACTA CTGGAAAGCG GGCGAAACCA TAGAAATCAA TCTATTACCC
AATATGGATG CCGCGCAGGC TTTAGAGCAA CAACTGGCCG CACATCCTAA ACAGAGTCTG
CGTAATACCT TAAGCCAGTG GTTACCTAAG CGGCTGGTGG AAGTGTTATT CGATGAAGCT
TTACTCAACA AAGCCTTAAA TCAGCTGGTT CATGCAGAGC GCGCCAAGTT AGTCGACGAT
CTGCACCGCT GGACAGTCTT AATGAATGGC ACGGAAGGTT ATCGCACCGC CGAAGTGACA
CTCGGCGGCG TGGATACCCA TGAACTCTCC TCCAAAACCA TGGAAGCCAT AAAAGTCCCC
GGCCTATTTT TTATCGGCGA AGTGATGGAT GTCAGCGGTT GGTTAGGCGG GTTTAACTTC
CAATGGGCCT GGGCATCTGG TGTGGCCGCA GGAAGGGTTG TGTGA
|
|---|
| Protein sequence | MKHHDVIIIG AGAAGLMCAA TAGYRGRDVL VLDNAKQAGR KILISGGGRC NFTNLKVEPA
NFICGNPHFV KSALARYPSQ QFIELVERHG IEYHERDHGQ LFCNDSAKEI VTMLLTECEW
AGVSIKLRTD ILAVSKTEAG RFELNTSNGE LSCDSLVIAT GGLSMPKLGA TPYGYQLAEQ
FGLKVLPTHA GLVPFTWHSE DKIRFEPLSG IAVPSRITAK DGTAFSEALL FTHRGLSGPA
ILQISNYWKA GETIEINLLP NMDAAQALEQ QLAAHPKQSL RNTLSQWLPK RLVEVLFDEA
LLNKALNQLV HAERAKLVDD LHRWTVLMNG TEGYRTAEVT LGGVDTHELS SKTMEAIKVP
GLFFIGEVMD VSGWLGGFNF QWAWASGVAA GRVV
|
|---|
| |