Gene Shewmr4_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0048 
SymbolgpsA 
ID4250663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp55066 
End bp56082 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content53% 
IMG OID638116590 
ProductNAD(P)H-dependent glycerol-3-phosphate dehydrogenase 
Protein accessionYP_732186 
Protein GI113968393 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.14359e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAACT CTGCCGATAT CACGGTGTTG GGGGCGGGTT CTTATGGCAC CGCCCTTGCC 
ATCTCTCTAG CCAGCAATGG TCATAAGACC TTGTTGTGGG GGCACGATCC TGCCCATATG
CAAACGCTCG CTCAGGACAA ATGCAACCAA GCTTTCTTGC CTGGTATTGC CTTCCCCGAG
TGTTTACATA TCGAAGCCGA CTTAGCCAAA GCCTTAGCGG CCAGCAATAA TGTGCTGGTT
GTGGTACCTA GCCATGTGTT TGGCTCGGTA CTGGCCCAAG CGAAACCTTT GTTACGCCAA
GATGCTCGCA TCGTATGGGC GACCAAAGGA CTCGAGCCTG AAACCGGACG TTTGCTGCAA
GATGTGGCCC GTGATGTGTT AGGCGAGCAA TATCCGCTGG CGGTATTGTC AGGACCTACG
TTTGCGAAGG AATTAGCCAT GGGGTTACCT ACGGCGATTT CGGTTGCGGG CACTTGTCCT
AAATTTACCG CTGAGCTAGT GGAATTGCTG CACAGCCCTA AACGCTTACG TGTTTACGCT
AACGACGACT TTATCGGCCT GCAATTAGGC GGCGCGGTGA AGAATGTTAT CGCGATTGGC
GCGGGGATGT CCGACGGTAT TGGCTTTGGT GCCAACGCCA GAACGGCGTT AATTACCCGT
GGTTTAGTCG AGTTAACCCG CTTAGGCGAA GCCTTAGGCG CCAGTACCGC CACCTTTATG
GGCATGGCTG GATTAGGCGA CCTAGTGTTG ACTTGTACCG ACAACCAATC CCGTAACCGC
CGCTTTGGTT TAGCCTTAGG TAAAGGCTGC GATGTGGATA CCGCCCAGGC CGAAATCGGC
CAAGTGGTTG AAGGTTATCG CAATACTAAA GAAGTGTTTA CCCTAGCGAA GCGCATGGGC
GTCGAAATGC CGATCACCGA GCAAATCTAC CAAGTGTTAT ACCAAGGCAA AGCGCCCTTG
GATGCCGCCA AAGAACTGCT CAGCAGAGAA AAGAAATCAG AAACGCCAGC GCAATAA
 
Protein sequence
MKNSADITVL GAGSYGTALA ISLASNGHKT LLWGHDPAHM QTLAQDKCNQ AFLPGIAFPE 
CLHIEADLAK ALAASNNVLV VVPSHVFGSV LAQAKPLLRQ DARIVWATKG LEPETGRLLQ
DVARDVLGEQ YPLAVLSGPT FAKELAMGLP TAISVAGTCP KFTAELVELL HSPKRLRVYA
NDDFIGLQLG GAVKNVIAIG AGMSDGIGFG ANARTALITR GLVELTRLGE ALGASTATFM
GMAGLGDLVL TCTDNQSRNR RFGLALGKGC DVDTAQAEIG QVVEGYRNTK EVFTLAKRMG
VEMPITEQIY QVLYQGKAPL DAAKELLSRE KKSETPAQ