Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0046 |
Symbol | |
ID | 4250661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 53881 |
End bp | 54315 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638116588 |
Product | rhodanese domain-containing protein |
Protein accession | YP_732184 |
Protein GI | 113968391 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000263421 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGAAT ATATCGAATT TTTTAAGGCT CACACTATGC TAAGTCTGGC TTGGGTGGGT TTGTTTGTAA TGCTTGTGGT CAGTGTGATC AAATCGAGCT TCTCTAAAAT CAAAAATGTC ACTCATCAAG AACTCACCAC TATGGTGAAC AGACAAGACG CTAAAGTCGT GGATGTGCGT TCAAATGACG AGTTCCGTAA GGGCCATATT GTTGATGCAG TTAACGTTAC GCTCGCGGAT ATCAAAAATA ATCAGGTTTC AGCCCTTGAA AAGTTCAAAG GCAGTCCCAT TATACTGGTA TGCAATGCTG GCATGACCTC GTCTCAAGCG GCTCAGCTTT TAAGTAAACA AGGTTTTGAA AACCTGTATA ACTTGAAAGG TGGTATGGGT GAATGGCAGG CAGCGAATAT GCCTGTTTCA AAAAGCAAAA GATAA
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Protein sequence | MQEYIEFFKA HTMLSLAWVG LFVMLVVSVI KSSFSKIKNV THQELTTMVN RQDAKVVDVR SNDEFRKGHI VDAVNVTLAD IKNNQVSALE KFKGSPIILV CNAGMTSSQA AQLLSKQGFE NLYNLKGGMG EWQAANMPVS KSKR
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