Gene Shewmr4_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0046 
Symbol 
ID4250661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp53881 
End bp54315 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content41% 
IMG OID638116588 
Productrhodanese domain-containing protein 
Protein accessionYP_732184 
Protein GI113968391 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.63421e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGAAT ATATCGAATT TTTTAAGGCT CACACTATGC TAAGTCTGGC TTGGGTGGGT 
TTGTTTGTAA TGCTTGTGGT CAGTGTGATC AAATCGAGCT TCTCTAAAAT CAAAAATGTC
ACTCATCAAG AACTCACCAC TATGGTGAAC AGACAAGACG CTAAAGTCGT GGATGTGCGT
TCAAATGACG AGTTCCGTAA GGGCCATATT GTTGATGCAG TTAACGTTAC GCTCGCGGAT
ATCAAAAATA ATCAGGTTTC AGCCCTTGAA AAGTTCAAAG GCAGTCCCAT TATACTGGTA
TGCAATGCTG GCATGACCTC GTCTCAAGCG GCTCAGCTTT TAAGTAAACA AGGTTTTGAA
AACCTGTATA ACTTGAAAGG TGGTATGGGT GAATGGCAGG CAGCGAATAT GCCTGTTTCA
AAAAGCAAAA GATAA
 
Protein sequence
MQEYIEFFKA HTMLSLAWVG LFVMLVVSVI KSSFSKIKNV THQELTTMVN RQDAKVVDVR 
SNDEFRKGHI VDAVNVTLAD IKNNQVSALE KFKGSPIILV CNAGMTSSQA AQLLSKQGFE
NLYNLKGGMG EWQAANMPVS KSKR