| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0033 |
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| Symbol | |
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| ID | 4250719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 37547 |
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| End bp | 38110 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638116572 |
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| Product | DNA topoisomerase type IA Zn finger domain-containing protein |
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| Protein accession | YP_732172 |
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| Protein GI | 113968379 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.417367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00409265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAAGA TCGATGAACA ACTATTTAGT GCCCATGAGC ACGCACTGGA AAAAGAATTC
GAGCTATGCC CAGAGTGTGG CAGCGAGTTG TCGGTAAAAC ATAGCAAACA TGGGAGTTTT
ATTGGTTGTA ACAACTATCC CACCTGCCAA TATACCCGTC CCTTAGTGCA GCATGAATCG
ATTGAAACCC AAGTGATTGA AGGTTCCAAG TGTCCCGAGT GCGGCCATGA GTTGGCGGTC
AAATCGGGGC GTTTTGGTAT CTTTATCGGT TGCACTCAAT ATCCCAGTTG TACCCACATA
GAAAGGCCAG ATCAGGAGAG CGATAAACCT GAGGTGGCAT GTCCCGAATG CAAAACTGGC
AAGCTAGAGC ATCGTACCAG CCGTTTTGGT AAGAGTTTTT ATGCTTGCAG TGCGTATCCC
AAATGCAAAT TCATCGTGAA TTATCCTCCC GTTGCCGAAA CTTGCCCGAG TTGTGGCTTT
GGTATTTTAG TCGAGCGCAA AGGGGCCGCG GGGATGCGTT TAGAATGTCC GCAAAAAAGC
TGTAAATACA AACGCGCGCT TTAG
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| Protein sequence | MSKIDEQLFS AHEHALEKEF ELCPECGSEL SVKHSKHGSF IGCNNYPTCQ YTRPLVQHES
IETQVIEGSK CPECGHELAV KSGRFGIFIG CTQYPSCTHI ERPDQESDKP EVACPECKTG
KLEHRTSRFG KSFYACSAYP KCKFIVNYPP VAETCPSCGF GILVERKGAA GMRLECPQKS
CKYKRAL
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