Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0026 |
Symbol | trkA |
ID | 4250712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 30403 |
End bp | 31812 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116565 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_732165 |
Protein GI | 113968372 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.570638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00237688 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATTA TCATATTAGG TGCGGGTCAA GTCGGGGGAA CCTTGGCCGA AAATTTGGTG GGTGAAAACA ACGATATCAC CATAGTCGAT AGCGACAAAT CCAGATTACG CGCCCTGCAG GATAAATATG ACCTTCGCGT CGTGGCGGGC CACGGTGCCC ACCCCGATGT ACTGAAAGAG GCTGGCGCCG AAGATGCCGA CATGCTGATT GCTGTGACGA ACAGCGATGA ATGCAACATG GTTGCCTGCC AGATGGCCTA CAGCCTATTT GGTACACCGA CTAAAATCGC CCGTATTCGC TCCGAACCTT ATCTGGCGAT GCGCGATAAA TTATTTATCG ACAGTGAAAC CAAAAATAGT GAGGGGCGCC CTCGCGGTGG TTTTGTGATC GATGAGCTTA TCGCACCTGA GCAGTTAGTA ACCGCTTACA TTCAACGTTT GGTTGAATAT CCAGGGGCGC TGCAAGTGCT CGAATTTGCC GAAGGTCGCT TAAGTTTGGT TGCGGTTCGC GCCTATTACG GCGGCCCTTT AGTCGGTAAT GCCTTGGCCG CGCTTCGCGA GCATATGCCA AATATTGATA CCCGGGTGGC GGCGATTTTC CGCCAAGGTC GCCCTATCAT GCCCCGAGGT ACGACTATTA TCGAAGCCGA TGACGAAGTG TTTTTCGTGG CCGACAGTCG CCATATCCGC GCGGTGATGA GTGAGATGCA AAAGCTGGAT AACTCCTACC GCAATATCAT GATTGCTGGC GGTGGTAACA TCGGCTTAGG CCTCGCTAAA CGCCTCGAAC GCACCCACTC GGTCAAGCTG ATTGAGCATA AGTTTGAACG CGCCGAAACA CTCTCTGAAC AGCTTGAAAA CACGACAGTA TTTTGTGGTG ACGCCTCAGA TCAAGAGTTG CTGCTCGAAG AACATATCGA CCAAACCGAC GTGTTTATTG CCGTCACCAA CGACGATGAA GCCAACATCA TGTCCGCCCT GTTAGCTAAA CGTATGGGGG CGAAAAAGGT GATGGTGTTG ATCCAACGCG AAGCCTATGT GGATATTGTG CAGGAAGCTA ATATCGATAT CGCGATTTCA CCCCAGCAGG CGACGATTTC AGCCTTACTA ACCCACATCC GCCAAGGCGA TATCTGTAAC GTGTATTCCT TACGCCGCGG CGCCGCCGAA GCGATTGAAG CCATTGCCCA TGGCGACTCC AGCACCTCTA AGGTTGTTGG CAAGGCGATT GGTGATATCA AGCTGCCGCC GGGAACCACC ATTGGCGCCA TAGTGCGTAA TGAAGAAGTG CTGATGGCCC ACGACAAGAC AGTGATAGAA CAAGGGGATC ACGTGATCCT GTTCCTCGTG AACAAAAAGT TTGTCGGCGA AGTCGAGAAA CTGTTCCAAC CTAGCGCCTT CTTCTTCTAA
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Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITIVD SDKSRLRALQ DKYDLRVVAG HGAHPDVLKE AGAEDADMLI AVTNSDECNM VACQMAYSLF GTPTKIARIR SEPYLAMRDK LFIDSETKNS EGRPRGGFVI DELIAPEQLV TAYIQRLVEY PGALQVLEFA EGRLSLVAVR AYYGGPLVGN ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHIR AVMSEMQKLD NSYRNIMIAG GGNIGLGLAK RLERTHSVKL IEHKFERAET LSEQLENTTV FCGDASDQEL LLEEHIDQTD VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS STSKVVGKAI GDIKLPPGTT IGAIVRNEEV LMAHDKTVIE QGDHVILFLV NKKFVGEVEK LFQPSAFFF
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