Gene Shewmr4_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0023 
Symbol 
ID4250709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp27840 
End bp28148 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content45% 
IMG OID638116562 
ProductArsR family transcriptional regulator 
Protein accessionYP_732162 
Protein GI113968369 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000124872 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000733869 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAATG ATATAGATGT AAATGCAATG GTAACTAATG CGGAAAGTGC GGCTAAATGG 
CTCAAAGCCA TAGCGAATCC TTATCGCTTA ATGATTTTGT GCCTATTGCT GGATAAAGAG
CTAAGCGTAA CCGAGCTGAA TGCAACTGTG CCCTTGAGCC AGTCGGCGCT ATCACAGCAT
TTGGCGGTAT TGCGAGCCGA AGACTTGGTC GATACCCGTA AGAGCTCGCA AATAGTGTAT
TACAAGCTTA AGAATGAAGA AGTCACCCAA GTGATTTCCA TTCTGCACAG CCGTTACTGC
GCCGTATAA
 
Protein sequence
MQNDIDVNAM VTNAESAAKW LKAIANPYRL MILCLLLDKE LSVTELNATV PLSQSALSQH 
LAVLRAEDLV DTRKSSQIVY YKLKNEEVTQ VISILHSRYC AV