| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0021 |
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| Symbol | |
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| ID | 4250707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 25794 |
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| End bp | 27251 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116560 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_732160 |
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| Protein GI | 113968367 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000191681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00118285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATACA AAACCATAAT AAGAATCATA GGTCTGCTTA TCGGCCTGTT CTCTATCACT
ATGCTGCCGC CAGCCTTAAT CGCCATTTGG TATAACGATG GCGGTGGTAC TGCGTTTATT
CAGGCATTTT TTGTCAGCTT ATTTATCGGT TTTTGGCTCT GGTATCCTAA TCGTCGCTGC
AAAGAGGAAT TACGAACCCG CGAGGGGTTT CTGATTGTGG TCCTGTTCTG GACCGTTCTT
GGCTCTATCG GTGCCTTACC CTTTATCTTC TCAAGCCAAC CCGATCTCAG CTGGACCGAC
AGTTTTTTCG AATCATTCTC CGCACTGACC ACCACGGGAG CCACAGTCAT TGTCGGGCTG
GACTCCTTGC CAAAGGCCAT TCTGTTTTAT CGACATATGC TGCAATGGCT CGGCGGTATG
GGGATCATCG TTTTAGCCGT GGCGATTCTG CCTGTGCTGG GCGTTGGGGG CATGCAGCTG
TATCGCGCCG AGATTCCTGG CCCTGTGAAG GACAGTAAGA TGACGCCGAG GATTGCCGAA
ACGGCCAAGG CGTTATGGTA CATCTATCTA TTGCTAACCA TTGCCTGTGC GGGCGCTTAT
TGGCTGGCGG GAATGAGCGT TTTCGATGCC GTGTGTCACT CGTTTTCGAC CATCGCTATC
GGGGGCTTTT CGACCCACGA TGCCAGTATG GGATACTTCG ACAGCTCAGT GATCAACCTG
ATTTGCGTGT TCTTTTTGAT TGTCTCGGCG GTGAACTTTA GCGTGCACTT TGCGGCATTT
TCGCGCCGCG GGATCAATTT TAGAGTCTAT TTTCGAGATA CCGAGTTCAA GATGCTGGTG
GCGATTCAGT TGGTGTTAAC GGCGATTTGT TTCTTAACCC TTTATCACTC AGGGATTTAT
GATTCGCCAG AGGAAACCTT AGATCACGCC TTATTCCAAG CGGTTTCGGT GGCGACAACC
GCTGGCTTTG GTACCGAAAG CTTCCATATG TGGCCACTGT TTCTGCCGAT TCTGTTGATT
TTCTCAAGCT TTATCGGTGG TTGTGGTGGT TCAACTGCGG GCGGGATTAA GGTGATCCGG
GTTATCCTAC TGCTGTTGCA AGGTTCGCGC GAACTTAAAC GCCTCGTTCA CCCTAAGGCG
ATGTTCTCGA TTCGTATCGG CTCCAAGGCG CTGCCTGACC GGGTTGTCGA TGCCGTGTGG
GGATTCTTCT CCGCCTATGC CTTAGTCTTC GTGCTGTGTA TGTTAGCGCT GATGGCTATG
GGGTTGGATG ATATTACCGC CTTTAGTGCC ACGGCGGCCT GCTTAAATAA CCTCGGTCCG
GGTCTTGGGG AAGTAGCGAG TAATTACGCC AGTATTGGTG ATGGTGCTAA ATGGGTGCTG
GTGGTAGCCA TGTTATTTGG TCGCCTCGAA GTCTTTACCT TGCTGATTTT GTTCACGCCA
ACTTTCTGGA GGGATTAA
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| Protein sequence | MQYKTIIRII GLLIGLFSIT MLPPALIAIW YNDGGGTAFI QAFFVSLFIG FWLWYPNRRC
KEELRTREGF LIVVLFWTVL GSIGALPFIF SSQPDLSWTD SFFESFSALT TTGATVIVGL
DSLPKAILFY RHMLQWLGGM GIIVLAVAIL PVLGVGGMQL YRAEIPGPVK DSKMTPRIAE
TAKALWYIYL LLTIACAGAY WLAGMSVFDA VCHSFSTIAI GGFSTHDASM GYFDSSVINL
ICVFFLIVSA VNFSVHFAAF SRRGINFRVY FRDTEFKMLV AIQLVLTAIC FLTLYHSGIY
DSPEETLDHA LFQAVSVATT AGFGTESFHM WPLFLPILLI FSSFIGGCGG STAGGIKVIR
VILLLLQGSR ELKRLVHPKA MFSIRIGSKA LPDRVVDAVW GFFSAYALVF VLCMLALMAM
GLDDITAFSA TAACLNNLGP GLGEVASNYA SIGDGAKWVL VVAMLFGRLE VFTLLILFTP
TFWRD
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