| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0019 |
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| Symbol | |
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| ID | 4250705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 23767 |
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| End bp | 25086 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116558 |
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| Product | proline dipeptidase |
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| Protein accession | YP_732158 |
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| Protein GI | 113968365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0806227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000125098 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCACT TGGCTCATCA CTATCATGCC CACATCGCCG AGCTTAATCG TCGAGTCGCT
GAAATTGTAT CGCGTGAAGC ATTATCAGGT TTAGTGATCC ACTCGGGTCA GCCACATCGA
ATGTTTTTGG ACGACATTAA TTATCCTTTT AAAGCCAATC CCCACTTCAA GGCTTGGTTA
CCTGTGTTGG ATAACCCTAA CTGCTGGTTA GTAGTAAACG GTCGCGATAA GCCACAACTG
ATTTTTTATC ACCCTGTGGA CTTTTGGCAT AAGGTGTCTG ACGTGCCGGA GATGTTCTGG
ACCGAGCATT TTGAGATCAA GTTACTCACT AAGGCCGATA AGGTTGCCGA GCTATTGCCT
AGCGATATCA CCAACTGGGC TTATTTAGGT GAGCATTTAG ATGTGGCTGA GGTACTGGGT
TTCACCAGTC GCAATCCTGA CTCTGTGATG AGCTATCTGC ATTTCCACCG TACCACTAAA
ACCGAATATG AACTCGAATG TATGCGCCGT GCGAACCAGA TCGCGGTGCA AGGGCATTTA
GCGGCTAAAA ATGCCTTCTA TAACGGTGCC AGCGAGTTTG AAATTCAGCA GCAGTATTTA
TCTGCCGTGG GACAGGGCGA GAACGAAGTG CCCTACGGTA ATATCATTGC CTTAAACCAA
AATGCGGCGA TTTTGCATTA CACCGCGCTC GAGCATCAAA ATCCGGCGCG GCGCTTATCT
TTTTTAATCG ATGCGGGCGC CAGTTATTTT GGCTACGCGT CGGATATCAC GCGTACCTAT
GCGTTTGAGA AGAATCGTTT CGATGAATTG ATCACTGCCA TGAACAAGGC GCAGCTCGAA
CTGATCGATA TGATGCGCCC AGGTGTGCGT TATCCCGATT TACACTTGGC TACCCATGGC
AAAGTCGCGC AAATGCTGTT GGATTTTGAG TTAGCCACGG GCGATGCCCA AGGCTTAGTC
GACCAAGGCA TAACCAGCGC CTTCTTCCCC CACGGACTCG GCCATATGTT AGGCTTGCAA
GTACATGATG TGGGAGGTTT TGCCTTCGAT GAGCGTGGTA CCCATATTCC GGCCCCTGAG
GCCCATCCGT TCCTGCGTTG CACCCGCATT TTAGCGCCAA ACCAAGTGCT AACGATGGAG
CCAGGATTAT ACATTATCGA TACTTTACTC AATGAGCTAA AACAAGATAG CCGTGACCAG
CAGATCAATT GGCGCACCGT TGATGAGTTG CGACCTTTCG GTGGTATCCG TATCGAGGAC
AATGTGATTG TGCATCAGGA TCGAAACGAA AATATGACCC GCGAGCTGGG CTTAGCGTGA
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| Protein sequence | MDHLAHHYHA HIAELNRRVA EIVSREALSG LVIHSGQPHR MFLDDINYPF KANPHFKAWL
PVLDNPNCWL VVNGRDKPQL IFYHPVDFWH KVSDVPEMFW TEHFEIKLLT KADKVAELLP
SDITNWAYLG EHLDVAEVLG FTSRNPDSVM SYLHFHRTTK TEYELECMRR ANQIAVQGHL
AAKNAFYNGA SEFEIQQQYL SAVGQGENEV PYGNIIALNQ NAAILHYTAL EHQNPARRLS
FLIDAGASYF GYASDITRTY AFEKNRFDEL ITAMNKAQLE LIDMMRPGVR YPDLHLATHG
KVAQMLLDFE LATGDAQGLV DQGITSAFFP HGLGHMLGLQ VHDVGGFAFD ERGTHIPAPE
AHPFLRCTRI LAPNQVLTME PGLYIIDTLL NELKQDSRDQ QINWRTVDEL RPFGGIRIED
NVIVHQDRNE NMTRELGLA
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