Gene Shewmr4_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0016 
Symbol 
ID4250615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp19494 
End bp19889 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content43% 
IMG OID638116555 
Producttransposase 
Protein accessionYP_732155 
Protein GI113968362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.47262e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACAT CAATTAACTC AAGCCGTAAG CGCACACAAC GAGATTACAC CTTAGCCTTT 
AAATTAGGCG TTGTAGAGCG TGTTGAAAAA GGCGAAATGA CGTACAAACA AGCCCAAGCC
CATTTTGGTA TTCAAGGCCG TTCAACGGTA CTCGTTTGGC TTAGAAAACA TGGTAGACTC
GATTGGTCGA AACCTTTTCA GCATCCCCTT ATGCCTAAGT CAAAAGAAAC CCCTGCCGAA
ACTATCAAGC GCCTTGAACG TGAGTTAGCA GAAGAGAAAC TGCGTAACAA AATCCTCAAT
GGTATGGTTG ATATCATGGA CAATGAATAT GGAGCAGGCC TCAGAAAAAA GTACTTATCC
GGTACGTCTG GCAAGCAAAA AGCAACGGCG AAATAA
 
Protein sequence
MTTSINSSRK RTQRDYTLAF KLGVVERVEK GEMTYKQAQA HFGIQGRSTV LVWLRKHGRL 
DWSKPFQHPL MPKSKETPAE TIKRLERELA EEKLRNKILN GMVDIMDNEY GAGLRKKYLS
GTSGKQKATA K