Gene Shewmr4_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0012 
Symbol 
ID4250611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp16381 
End bp16818 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content52% 
IMG OID638116551 
Producthypothetical protein 
Protein accessionYP_732151 
Protein GI113968358 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.03173e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAAAC TAGTTGCTAT CGCCTACAAA ACGGTTAAAC GCGGGCCAAT GAACGAAGTG 
CTATGCGCGA ATGTCACCCA GCACAGCGGC GTCGAAAAAG ATGTTTTTGG TCGCCCGGGT
AAACGGCAAG TCACGGTACT GTCGCTGCAG CAGTGGCAAA TAGCTTGTCA GAGCATAGAT
GCAAATTTAC CTTGGACGAC TCGCCGAGCA AACCTATTAG TCGATGGATA TAGTTTTGGG
GCAGCGGATG TGGGTAAGCA GCTCCGCATT GGTGATCTCT GCCTCGAAGT AACAGGTGAA
ACCGATCCCT GCAAGAAGAT GGAACAGGCT CATGCTGGCT TGGAATCCGC GCTTACTCCC
GATTGGCGAG GCGGCGTCAC CTGCCGTGTC ATCAATGATG CCATGATCCA TATCGGCGAC
CCCGTTACAT TAGACTAA
 
Protein sequence
MPKLVAIAYK TVKRGPMNEV LCANVTQHSG VEKDVFGRPG KRQVTVLSLQ QWQIACQSID 
ANLPWTTRRA NLLVDGYSFG AADVGKQLRI GDLCLEVTGE TDPCKKMEQA HAGLESALTP
DWRGGVTCRV INDAMIHIGD PVTLD