Gene Shewmr4_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0010 
Symbol 
ID4250609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp12335 
End bp12907 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content45% 
IMG OID638116549 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_732149 
Protein GI113968356 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.02981e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGAAA TCCGCTGTAA TTGGGTCAGC GATGATCCCT TGTATCGTGA GTACCACGAT 
AAGGTGTGGG GGCGCCCAGT TTATGATTCG AAGGAGTTAT TTGCCAAGCT CTGTTTAGAC
GGGCAACAAG CTGGGTTGTC TTGGATTACT ATCTTAAAGA AACAACAAAA TTACGAACAA
GCCTTTGCGG ATTTTGAGCC CGCAGTGATT GCAACTTTCG ACGATGCTAA GGTAGAGGAG
TTGATGAACA ATCCTGGTAT TGTTCGTAAT CGCCTTAAGA TCCATTCGAT TATTCGTAAT
GCAAAAGGTT ATTTAGCCTA CACTGCGGAT GGCAAAGATT TTGCTGAATT TCTGTGGAGC
TTTGTTGGTG GTAAGCCTTT GGTTAATCAG TTTACTTCTA TGTCGCAGGT GCCAGCACAG
ACACCTGAGT CTGAGGCCAT GTCCAAGGCG TTAAAAAAAC TCGGCTTTAA CTTTGTTGGC
CCAACGATTT GTTATGCTTT TATGCAGGCA GTGGGAATGG TGAACGATCA TCTAGTTGAT
TGCATCGCCT ATGATGCTTG CTGTGGCGGC TAA
 
Protein sequence
MEEIRCNWVS DDPLYREYHD KVWGRPVYDS KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ 
AFADFEPAVI ATFDDAKVEE LMNNPGIVRN RLKIHSIIRN AKGYLAYTAD GKDFAEFLWS
FVGGKPLVNQ FTSMSQVPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVD
CIAYDACCGG