| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0010 |
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| Symbol | |
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| ID | 4250609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 12335 |
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| End bp | 12907 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638116549 |
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| Product | DNA-3-methyladenine glycosylase I |
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| Protein accession | YP_732149 |
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| Protein GI | 113968356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000602981 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAAGAAA TCCGCTGTAA TTGGGTCAGC GATGATCCCT TGTATCGTGA GTACCACGAT
AAGGTGTGGG GGCGCCCAGT TTATGATTCG AAGGAGTTAT TTGCCAAGCT CTGTTTAGAC
GGGCAACAAG CTGGGTTGTC TTGGATTACT ATCTTAAAGA AACAACAAAA TTACGAACAA
GCCTTTGCGG ATTTTGAGCC CGCAGTGATT GCAACTTTCG ACGATGCTAA GGTAGAGGAG
TTGATGAACA ATCCTGGTAT TGTTCGTAAT CGCCTTAAGA TCCATTCGAT TATTCGTAAT
GCAAAAGGTT ATTTAGCCTA CACTGCGGAT GGCAAAGATT TTGCTGAATT TCTGTGGAGC
TTTGTTGGTG GTAAGCCTTT GGTTAATCAG TTTACTTCTA TGTCGCAGGT GCCAGCACAG
ACACCTGAGT CTGAGGCCAT GTCCAAGGCG TTAAAAAAAC TCGGCTTTAA CTTTGTTGGC
CCAACGATTT GTTATGCTTT TATGCAGGCA GTGGGAATGG TGAACGATCA TCTAGTTGAT
TGCATCGCCT ATGATGCTTG CTGTGGCGGC TAA
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| Protein sequence | MEEIRCNWVS DDPLYREYHD KVWGRPVYDS KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ
AFADFEPAVI ATFDDAKVEE LMNNPGIVRN RLKIHSIIRN AKGYLAYTAD GKDFAEFLWS
FVGGKPLVNQ FTSMSQVPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVD
CIAYDACCGG
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