Gene Shewmr4_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0009 
SymbolglyQ 
ID4250608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp11311 
End bp12216 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content49% 
IMG OID638116548 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_732148 
Protein GI113968355 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.85129e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACGA AACACGACGT AAAAACATTT CAGGGTTTCA TTCTAACCCT ACAGGAATAT 
TGGGCGCAGC AAGGCTGTGC AATCGTTCAA CCTTTAGATA TGGAAGTCGG TGCGGGTACA
TTCCACCCAC AAACTTTCCT ACGCTCTCTA GGGCCTGAGC CAATGAGCAG TGCCTATGTG
CAGCCATCGC GCCGCCCTAC CGACGGCCGT TACGGTGAAA ACCCAAACCG TCTGCAGCAC
TACTACCAAT TCCAAGTCGT GTTAAAACCG TCACCGGATA ATATCCAAGA ACTCTATTTA
GGTTCTCTGC AAGCTCTTGG TATTGATACA CAAATCCATG ATATCCGTTT TGTAGAAGAC
AACTGGGAAT CACCAACGCT CGGCGCTTGG GGTCTGGGTT GGGAAGTCTG GTTAAACGGC
ATGGAAGTGA CTCAGTTTAC TTACTTCCAA CAGGTCGGCG GCTTAGAGTG TAGCCCTGTC
ACGGGTGAGA TCACCTACGG TTTAGAGCGT CTCGCCATGT ATATCCAAGG TGTGGATAGC
GTATACGACC TCGTATGGAC CGATGGCCCA ATGGGTCGCA TCACCTACGG CGATGTGTTC
CACCAAAACG AAGTTGAGCA ATCGACCTAT AACTTTGAGC ACGCAGACGT AGACTTTATG
TTTGCCCTGT TCGATCAATG CGAAAAGATG TGTCAGCACT TATTGTCGCT TGAAAAACCA
TTACCTCTGC CAGCCTATGA GCAAGTGATG AAAGCCTCGC ATGCTTTCAA CCTGCTCGAT
GCACGCCACG CCATTTCAGT GACTGAACGT CAGCGTTATA TCCTGCGCGT TCGTACAATG
GCTAAAGCCG TTGCTGAATC CTATTATCAG GCACGCGAAG CGCTTGGCTT CCCAATGTGT
AAGTAG
 
Protein sequence
MTTKHDVKTF QGFILTLQEY WAQQGCAIVQ PLDMEVGAGT FHPQTFLRSL GPEPMSSAYV 
QPSRRPTDGR YGENPNRLQH YYQFQVVLKP SPDNIQELYL GSLQALGIDT QIHDIRFVED
NWESPTLGAW GLGWEVWLNG MEVTQFTYFQ QVGGLECSPV TGEITYGLER LAMYIQGVDS
VYDLVWTDGP MGRITYGDVF HQNEVEQSTY NFEHADVDFM FALFDQCEKM CQHLLSLEKP
LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRTM AKAVAESYYQ AREALGFPMC
K