| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0009 |
|---|
| Symbol | glyQ |
|---|
| ID | 4250608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 11311 |
|---|
| End bp | 12216 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638116548 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_732148 |
|---|
| Protein GI | 113968355 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000785129 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA AACACGACGT AAAAACATTT CAGGGTTTCA TTCTAACCCT ACAGGAATAT
TGGGCGCAGC AAGGCTGTGC AATCGTTCAA CCTTTAGATA TGGAAGTCGG TGCGGGTACA
TTCCACCCAC AAACTTTCCT ACGCTCTCTA GGGCCTGAGC CAATGAGCAG TGCCTATGTG
CAGCCATCGC GCCGCCCTAC CGACGGCCGT TACGGTGAAA ACCCAAACCG TCTGCAGCAC
TACTACCAAT TCCAAGTCGT GTTAAAACCG TCACCGGATA ATATCCAAGA ACTCTATTTA
GGTTCTCTGC AAGCTCTTGG TATTGATACA CAAATCCATG ATATCCGTTT TGTAGAAGAC
AACTGGGAAT CACCAACGCT CGGCGCTTGG GGTCTGGGTT GGGAAGTCTG GTTAAACGGC
ATGGAAGTGA CTCAGTTTAC TTACTTCCAA CAGGTCGGCG GCTTAGAGTG TAGCCCTGTC
ACGGGTGAGA TCACCTACGG TTTAGAGCGT CTCGCCATGT ATATCCAAGG TGTGGATAGC
GTATACGACC TCGTATGGAC CGATGGCCCA ATGGGTCGCA TCACCTACGG CGATGTGTTC
CACCAAAACG AAGTTGAGCA ATCGACCTAT AACTTTGAGC ACGCAGACGT AGACTTTATG
TTTGCCCTGT TCGATCAATG CGAAAAGATG TGTCAGCACT TATTGTCGCT TGAAAAACCA
TTACCTCTGC CAGCCTATGA GCAAGTGATG AAAGCCTCGC ATGCTTTCAA CCTGCTCGAT
GCACGCCACG CCATTTCAGT GACTGAACGT CAGCGTTATA TCCTGCGCGT TCGTACAATG
GCTAAAGCCG TTGCTGAATC CTATTATCAG GCACGCGAAG CGCTTGGCTT CCCAATGTGT
AAGTAG
|
|---|
| Protein sequence | MTTKHDVKTF QGFILTLQEY WAQQGCAIVQ PLDMEVGAGT FHPQTFLRSL GPEPMSSAYV
QPSRRPTDGR YGENPNRLQH YYQFQVVLKP SPDNIQELYL GSLQALGIDT QIHDIRFVED
NWESPTLGAW GLGWEVWLNG MEVTQFTYFQ QVGGLECSPV TGEITYGLER LAMYIQGVDS
VYDLVWTDGP MGRITYGDVF HQNEVEQSTY NFEHADVDFM FALFDQCEKM CQHLLSLEKP
LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRTM AKAVAESYYQ AREALGFPMC
K
|
|---|
| |