| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0008 |
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| Symbol | glyS |
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| ID | 4250607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 9235 |
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| End bp | 11301 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116547 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_732147 |
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| Protein GI | 113968354 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000120926 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTTG AAAACTTACT CATCGAGTTA GGCACTGAAG AATTGCCGCC AAAGGCGCTG
CGTAAACTGG CTGAGTCTTT CTTAGCGAAC TTTACCGAAG AATTAACTAA AGCCGATTTA
GCTTTTAAAT CAGCTGTTTG GTACGCTGCG CCCCGCCGTC TAGCCATTAA TGTGACTGAA
CTAGCGATTG CTCAAGCGGA CAAAATCGTT GAAAAACGCG GCCCAGCTGT CAGCTCAGCC
TTCGATGCCG AAGGTAAACC AACGAAAGCC GCTGAAGGTT GGGCACGTGG TAACGGTATT
ACCGTTGACC AAGCTGAGCG TTTAGTGACA GACAAAGGTG AATGGCTGGT TTATAACGCC
AAAGTCGAAG GCGTTGAAAC CAAGAGCTTA ATCGCTGCTA TGGCACAACG TGCTTTAGAT
AAGTTACCTA TTCCTAAGCC AATGCGCTGG GGAAGCAGCA AGACACAATT CATTCGCCCT
GTTCACACCG CCACTATGTT GTTAGGCAGT GAGTTAATCG AAGGTGAATT ACTCGGCATT
AAATCGGCAC GCAATGTTCG TGGCCACCGC TTTATGGGGA CAGGCTTCGA GCTTGACCAT
GCAGACAACT ACCTGACACT GCTGAAAGAA AAAGGTAAAG TCATCGCCGA TTACGAAAGC
CGTAAAGCCT TAATCAAAGC CGATGCGGAA AAAGCGGCCG CTAAGATTGG TGGCACCGCC
GATATCGAAG ACGACCTGCT GGAAGAAGTC ACCTCTTTAG TTGAATGGCC AGTCGTATTA
ACCGCAAGCT TTGAAGAGAA GTTCTTGAAC GTGCCTTCAG AGGCCTTGGT TTATACGATG
AAGGGCGATC AGAAATACTT CCCAGTATTC GATGAAGCCG GTAAGTTACT GCCAAACTTC
ATCTTTGTCG CGAACATCGA ATCAAAAGAT CCGGCGCAAA TCATTGCGGG TAACGAGAAA
GTGGTTCGTC CACGCTTGGC CGACGCCGAG TTCTTCTTCA ATACCGACAA AAAACACACG
CTGGAATCAC GTTTACCAAG TCTTGAGACC GTCTTGTTCC AACAACAACT CGGTACCTTA
AAAGACAAAG TCACTCGTAT CTCTGCCCTA GCCGCCTTTA TTGCCGAGCA AACTGGCGCT
AACGCCGTTG ATGCCGCCCG TGCTGGTTTA TTGTCTAAAA CAGACTTAAT GACCAATATG
GTGATGGAGT TTACCGATAC TCAAGGCACT ATGGGCATGC ATTACGCCCG TCTAGACGGT
GAAACTGAAG CCGTAGCCTT GGCGATGGAA GAGCAATACA AGCCAAAATT CTCTGGCGAT
ACGGTTCCGA CAGCAGCGGT ATCTTGCGCA GTAGCTTTAG CGGATAAACT CGACACCTTA
GTCGGTATCT TCGGTATTGG TCAGGCACCT AAGGGCGCTG CCGACCCATT CGCACTGCGC
CGCGCCGCTA TCGGTGTGCT ACGCATTATC GTTGAGAACA AGTTGCCACT GGACTTAGTG
ACCCTAATTG CTAAGGCTCA AGAACTCCAT GGCACTAACT TAAGCAACGC GAATGCAAGC
GATGAAGTGC TTGAGTTCTT AATGGCGCGT TTCCGTGCTT GGTACCAAGA TAAAGGTATC
GATGTTGACG TGATCCTCGC CGTATTAGCA CGTCGCCCAA CTCGCCCAGC TGATTTTGAT
AGCCGTATCA ATGCGGTATC ACACTTCAGA AGCTTAGAAG CCTCTAGTGC TCTGGCAGCG
GCGAATAAGC GTGTGTCTAA CATTCTGGCG AAAGTGGAAG GCGAATTACC TACAGCAATT
AATTCGGCTC TGTTAGCCGA AGCCGCAGAA CAAGCATTAG CCGCTAAGCT TGCCGAACTG
CAACCTCAAC TCGCTCCACT GTTTGCAAAT GCAGATTACC AACAGGCATT AACGCTGCTG
TCGAGCTTAC GTGAAAGTGT TGACCAGTTC TTCGAAGACG TGATGGTTAT GGCGGATGAC
GAAGCATTGA AAAACAACCG TTTAGCACTG CTTAATAACC TACGTGAGCA GTTCTTACAT
GTTGCGGATA TTTCTCTGCT TCAGTAA
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| Protein sequence | MNFENLLIEL GTEELPPKAL RKLAESFLAN FTEELTKADL AFKSAVWYAA PRRLAINVTE
LAIAQADKIV EKRGPAVSSA FDAEGKPTKA AEGWARGNGI TVDQAERLVT DKGEWLVYNA
KVEGVETKSL IAAMAQRALD KLPIPKPMRW GSSKTQFIRP VHTATMLLGS ELIEGELLGI
KSARNVRGHR FMGTGFELDH ADNYLTLLKE KGKVIADYES RKALIKADAE KAAAKIGGTA
DIEDDLLEEV TSLVEWPVVL TASFEEKFLN VPSEALVYTM KGDQKYFPVF DEAGKLLPNF
IFVANIESKD PAQIIAGNEK VVRPRLADAE FFFNTDKKHT LESRLPSLET VLFQQQLGTL
KDKVTRISAL AAFIAEQTGA NAVDAARAGL LSKTDLMTNM VMEFTDTQGT MGMHYARLDG
ETEAVALAME EQYKPKFSGD TVPTAAVSCA VALADKLDTL VGIFGIGQAP KGAADPFALR
RAAIGVLRII VENKLPLDLV TLIAKAQELH GTNLSNANAS DEVLEFLMAR FRAWYQDKGI
DVDVILAVLA RRPTRPADFD SRINAVSHFR SLEASSALAA ANKRVSNILA KVEGELPTAI
NSALLAEAAE QALAAKLAEL QPQLAPLFAN ADYQQALTLL SSLRESVDQF FEDVMVMADD
EALKNNRLAL LNNLREQFLH VADISLLQ
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