Gene Shewmr4_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0005 
Symbol 
ID4250604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp6341 
End bp6997 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID638116544 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_732144 
Protein GI113968351 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.52518e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAACTCT ATATTGGCAA TAAAAACTAC TCTAGTTGGT CACTCCGCGC TTGGTTAATG 
GCTGCAAAAT CAGGTATTCA GTTCGATGAA ATCCTATTAC AGCTCGATAC CGATAGCTTT
TATCAGCGGC TCAAATCCAT TTCGCCTACC TTAAAAGTTC CAACTCTCAT CGATGGAAAT
ATTACGGTTT GGGATTCGCT GTCGATTTGC GAATATATCA ACGATACTTA TCTTTCAGGT
TCTGCCTGGC CACAAGACCC GAAACAAAAA GCGAAGGCTC GCTCCTTCGC CTGTGAAATG
CATTCAGGCT TTCATGCCCT GCGAAATGCC CTGCCGATGA ATATCCGTGC CCATCGTTAT
GTCGAATTAA GCTCTGCCGT GTTGCAGGAT ATTGCCCGCA TCGACAATAT ATGGTCACAG
CAAATGGCAG AGTTTGCCAC CACCCAAGGC ACTTGGTTAT TTGGCAAATG GTCGATAGCC
GATATGATGT TTGCGCCGGT TGTGATGCGC TTCTTCACCT ATGAGATTGA AGTCTCCCAA
GCGAGTCGAG CCTATATGGA ATTTATCGTG AGCCAGCCAG AAATGCAGGC CTGGATACAA
GCCGCTAAAG CCGAAACTGA AATAGTGGAC GCCGACGAGG CAGGTGTTGA TAGATAG
 
Protein sequence
MELYIGNKNY SSWSLRAWLM AAKSGIQFDE ILLQLDTDSF YQRLKSISPT LKVPTLIDGN 
ITVWDSLSIC EYINDTYLSG SAWPQDPKQK AKARSFACEM HSGFHALRNA LPMNIRAHRY
VELSSAVLQD IARIDNIWSQ QMAEFATTQG TWLFGKWSIA DMMFAPVVMR FFTYEIEVSQ
ASRAYMEFIV SQPEMQAWIQ AAKAETEIVD ADEAGVDR