Gene Shewmr4_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0001 
SymboldnaA 
ID4250600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp79 
End bp1461 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content46% 
IMG OID638116540 
Productchromosomal replication initiation protein 
Protein accessionYP_732140 
Protein GI113968347 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.79736e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.13535e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCGGTTT CACTTTGGCA ACAATGTATC GGAAGACTGC AAGACGAGCT TTCTGCTCAG 
CAGTTCAGTA TGTGGATCAG ACCGTTACAA GCCGAAATGG ATGGAGATAC TTTGGTGCTT
TATGCGCCTA ACCGCTTCGT GCTCGATTGG GTTAGGGATA AATACATCAA CATCATTAAT
CAGTTTTTTA CTGAGCAAAT GGGTAATGAT GCACCTAAGT TACGCTTCGA TATCGGTAGC
CGTCCGTCAG CGAAAAAGCC TGAGCCAGCA CCTGTTGCGG CTGTGCGTGT GCCTAATCCC
CAAACCAAAG CCTCAGTAGG GACTTCATTT AATACTACTG AGCCTGTTGC CAATACCAAT
CATCGCAGCA ATATCAATCC CACTTACCAA TTCGATAACT TCGTCGAGGG TAAGTCTAAC
CAACTTGGCA AAGCGGCCGC ACTACAAGTG GCTGAAAATC CAGGTGGTGC CTATAACCCA
CTGTTCCTTT ATGGCGGTAC GGGTTTAGGT AAGACCCACT TATTACATGC TGTGGGTAAT
GGCATCATTA AAAATAATCC TAATGCCAAG GTGGTTTACA TGCATTCCGA GCGTTTTGTG
CAAGACATGG TCAAAGCGCT ACAAAACAAT GCGATCGAAG AATTCAAACG TTACTACCGT
AGTGTCGATG CGCTGTTTAT CGACGATATT CAATTCTTTG CCAATAAAGA CAGATCGCAG
GAAGAATTTT TCCATACCTT TAACGCGTTG CTTGAAGGTA ATCATCAGAT CATCCTGACA
TCGGATCGTT ATCCTAAAGA GATCGACGGG GTAGAGGACA GATTAAAATC TCGTTTCGGT
TGGGGCTTAA CGGTTGCGAT TGAGCCGCCA GAGCTCGAAA CCCGTGTGGC GATTTTGATG
CGTAAAGCCC AGGAGAGTGG TATCAATCTC CCCGACGAAG TCGCCTTCTT TATTGCTAAG
CGCTTACGTT CAAACGTTCG CGAGTTAGAA GGGGCGTTAA ACCGCGTGAT CGCCAACGCT
AACTTTACTG GCCGCCCAAT AACGATTGAT TTTGTGCGTG AAGCCCTGCG TGACCTCTTG
GCACTGCAGG AAAAATTAGT CACTATAGAC AACATTCAGA AAACCGTAGC TGAATACTAC
AAAATCAAGA TGGCTGATAT GTTGTCTAAG CGTCGTTCGC GCAGTGTTGC GCGCCCTAGA
CAAGTGGCCA TGGCGTTATC CAAAGAATTA ACTAACCAGA GCTTGCCGGA AATTGGTGAT
GCCTTTGGTG GTCGAGATCA CACCACAGTG TTACATGCCT GTCGTAAGAT TGCTCAGCTA
CGGGAAGAGA GTCACGACAT TAAAGAAGAT TATGCTAACT TGATTAGAAC CTTATCTTCT
TAA
 
Protein sequence
MAVSLWQQCI GRLQDELSAQ QFSMWIRPLQ AEMDGDTLVL YAPNRFVLDW VRDKYINIIN 
QFFTEQMGND APKLRFDIGS RPSAKKPEPA PVAAVRVPNP QTKASVGTSF NTTEPVANTN
HRSNINPTYQ FDNFVEGKSN QLGKAAALQV AENPGGAYNP LFLYGGTGLG KTHLLHAVGN
GIIKNNPNAK VVYMHSERFV QDMVKALQNN AIEEFKRYYR SVDALFIDDI QFFANKDRSQ
EEFFHTFNAL LEGNHQIILT SDRYPKEIDG VEDRLKSRFG WGLTVAIEPP ELETRVAILM
RKAQESGINL PDEVAFFIAK RLRSNVRELE GALNRVIANA NFTGRPITID FVREALRDLL
ALQEKLVTID NIQKTVAEYY KIKMADMLSK RRSRSVARPR QVAMALSKEL TNQSLPEIGD
AFGGRDHTTV LHACRKIAQL REESHDIKED YANLIRTLSS